| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g63990.1 |
| Family | GH51 |
| Protein Properties | Length: 676 Molecular Weight: 74127.4 Isoelectric Point: 4.5844 |
| Chromosome | Chromosome/Scaffold: 1 Start: 63184527 End: 63195479 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 187 | 537 | 0 |
| HTITSDAEDFTEWTKVEFDLQASEGNTNSRLQLTTSKSGIVWFDQVSLMPSDTYMGHGYRKDLASMLANLKPKFLKFPGGNYVMGNYLLNAFRWSETVGP WEERPGHFNDVWGYWTDDGLGLFEFLQLAEDLGACPVWVVNDGASRNEQVPSATIASFVKDVVDGIEFARGDTGTSWGSVRAAMGHPEPFQLRYISMGNQ ECSMQYYKENYRKFYSAIKASYPDIKIISSCDRSAISPVEPADLYDVHVYTSSGDMFSKSSMFDNTPRGGPKAIVSEYAVTGNDAGRGTLVAALAEAAFL VGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFDSWQHYGCPNYWMLHFF | |||
| Full Sequence |
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| Protein Sequence Length: 676 Download |
| MAVPRACLDR RLFQVLCLVC AVCQIFFVGS ATGQTAQLSV DASPQNAQMI PDNMFGIFFE 60 EINHAGAGGL WAELVNNRGF EAGGPNTPSN IEPWLIIGDE TNIIVATDRS SCFASNPIAL 120 KMEVLCQSSG TDVCPPGGVG IYNPGFWGMN IEKTKVYKLS MYIKSSDSVD LTVSLTSSDG 180 LQNLAAHTIT SDAEDFTEWT KVEFDLQASE GNTNSRLQLT TSKSGIVWFD QVSLMPSDTY 240 MGHGYRKDLA SMLANLKPKF LKFPGGNYVM GNYLLNAFRW SETVGPWEER PGHFNDVWGY 300 WTDDGLGLFE FLQLAEDLGA CPVWVVNDGA SRNEQVPSAT IASFVKDVVD GIEFARGDTG 360 TSWGSVRAAM GHPEPFQLRY ISMGNQECSM QYYKENYRKF YSAIKASYPD IKIISSCDRS 420 AISPVEPADL YDVHVYTSSG DMFSKSSMFD NTPRGGPKAI VSEYAVTGND AGRGTLVAAL 480 AEAAFLVGLE RNSDVVEMAS CAPLFVNDND RRWSPDAIVF DSWQHYGCPN YWMLHFFKDS 540 SGATLHPSTV HVSNYNQLVA SAITWQNSND GNTYLKIKVV NFGDKALDLS ISITGLDSNI 600 QTFGSIKTVL TSGWLRDENS FQKPDKVVPV GSPITNAREQ MSLVLDPYSL TSYDLLLDSS 660 TKMHPVLDSS LRSSM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.001 | 529 | 647 | 126 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 4.0e-27 | 244 | 386 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-27 | 462 | 647 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-35 | 462 | 647 | 196 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95656.1 | 0 | 1 | 675 | 1 | 675 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAC10349.1 | 0 | 1 | 660 | 1 | 659 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEC75141.1 | 0 | 1 | 675 | 1 | 679 | hypothetical protein OsI_11337 [Oryza sativa Indica Group] |
| GenBank | EEE58961.1 | 0 | 1 | 675 | 1 | 679 | hypothetical protein OsJ_10647 [Oryza sativa Japonica Group] |
| RefSeq | XP_002463418.1 | 0 | 1 | 660 | 1 | 661 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 2e-18 | 243 | 658 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 2e-18 | 243 | 658 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 2e-18 | 243 | 658 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 2e-18 | 243 | 658 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 2e-18 | 243 | 658 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
