| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g69490.1 |
| Family | CE11 |
| Protein Properties | Length: 320 Molecular Weight: 34286.9 Isoelectric Point: 6.3972 |
| Chromosome | Chromosome/Scaffold: 1 Start: 67992663 End: 67999614 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 25 | 307 | 0 |
| QQTLAAAVSRSGVGLHSGARATATLLPTRAGEGRYFVVEGEETRVAAEVGNAETQSPLCTTLRSGGGAARVRTVEHLLSAMEALGVDNCRVEVSGSDEVP LLDGSAQEWVEAIRSAGLCVAEDISGEKLEKMAPKIDEPVYLRKDDCFVSAFPSSQIHITYGIDFPKAPAIGCQWFTTFLDANIYSSKIAPARTFCIFEE VEKMRSAGLIKGGSLESAMVCSMTRGWLNPPLRFEDEPCRHKVLDLIGDFSLLAQNGNQGFPIAHVVAYKAGHALHTNFLRQL | |||
| Full Sequence |
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| Protein Sequence Length: 320 Download |
| MTAAARGLQS VSRAAFSWQP TGRAQQTLAA AVSRSGVGLH SGARATATLL PTRAGEGRYF 60 VVEGEETRVA AEVGNAETQS PLCTTLRSGG GAARVRTVEH LLSAMEALGV DNCRVEVSGS 120 DEVPLLDGSA QEWVEAIRSA GLCVAEDISG EKLEKMAPKI DEPVYLRKDD CFVSAFPSSQ 180 IHITYGIDFP KAPAIGCQWF TTFLDANIYS SKIAPARTFC IFEEVEKMRS AGLIKGGSLE 240 SAMVCSMTRG WLNPPLRFED EPCRHKVLDL IGDFSLLAQN GNQGFPIAHV VAYKAGHALH 300 TNFLRQLSGR ITADQEKLA* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-62 | 25 | 319 | 329 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 1.0e-73 | 25 | 316 | 295 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 2.0e-86 | 23 | 316 | 310 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 1.0e-86 | 25 | 316 | 295 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 3.0e-104 | 25 | 307 | 287 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN52736.1 | 0 | 3 | 319 | 4 | 312 | Hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ABF94722.1 | 0 | 3 | 281 | 4 | 280 | UDP-3-0-acyl N-acetylglucosamine deacetylase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE58623.1 | 0 | 3 | 319 | 4 | 319 | hypothetical protein OsJ_09977 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049426.1 | 0 | 3 | 319 | 4 | 318 | Os03g0223900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002468246.1 | 0 | 2 | 319 | 3 | 322 | hypothetical protein SORBIDRAFT_01g042410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xxe_A | 1e-38 | 25 | 310 | 4 | 266 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 4fw7_D | 3e-38 | 25 | 307 | 7 | 277 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 4fw7_C | 3e-38 | 25 | 307 | 7 | 277 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 4fw7_B | 3e-38 | 25 | 307 | 7 | 277 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 4fw7_A | 3e-38 | 25 | 307 | 7 | 277 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | UDPACYLGLCNACDEACETYL-RXN | EC-3.5.1.108 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HX136805 | 258 | 6 | 263 | 0 |
| CK207177 | 248 | 6 | 253 | 0 |
| CT850072 | 294 | 3 | 296 | 0 |
| CA246559 | 201 | 119 | 319 | 0 |
| HX136828 | 181 | 140 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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