| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g71076.1 |
| Family | GH10 |
| Protein Properties | Length: 341 Molecular Weight: 37900.7 Isoelectric Point: 4.8183 |
| Chromosome | Chromosome/Scaffold: 1 Start: 69181600 End: 69182622 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 6 | 255 | 0 |
| LSNAAYQSWFTSRFTVTTFENEMKWYSTEPSPGKEDYSVADAMLALAKQHGIGVRGHNVFWDDPKQQPRWVQALPYTDLLAASSRRIRSFVSRYAGEVIA WDVVNENLHFSFFERQFGWDASTAFYAAARLLDGAPGALMFMNEFNTLEQPGDMAAQPARYVQRLKQIISSYPENGAGMAIGLEGHFTNPVNIPYMRAAL DTLSQVGLPVWLTEVDVAAGPQQAAHLEEVLREAYAHPAVQGVILWSAWH | |||
| Full Sequence |
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| Protein Sequence Length: 341 Download |
| MSREILSNAA YQSWFTSRFT VTTFENEMKW YSTEPSPGKE DYSVADAMLA LAKQHGIGVR 60 GHNVFWDDPK QQPRWVQALP YTDLLAASSR RIRSFVSRYA GEVIAWDVVN ENLHFSFFER 120 QFGWDASTAF YAAARLLDGA PGALMFMNEF NTLEQPGDMA AQPARYVQRL KQIISSYPEN 180 GAGMAIGLEG HFTNPVNIPY MRAALDTLSQ VGLPVWLTEV DVAAGPQQAA HLEEVLREAY 240 AHPAVQGVIL WSAWHPQGCY VMCLTDNSFV NLPQGDVVDR LLAEWKTAAQ VGVTDAQGYF 300 QAELVHGEYK VTVTHPSLNA SVEQSVMVEP GLGEHYFIQA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-30 | 19 | 251 | 256 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-47 | 3 | 251 | 270 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-71 | 28 | 278 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94504.1 | 0 | 1 | 339 | 229 | 566 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACL53134.1 | 0 | 1 | 338 | 214 | 551 | unknown [Zea mays] |
| GenBank | ACL53900.1 | 0 | 1 | 338 | 89 | 426 | unknown [Zea mays] |
| DDBJ | BAH92031.1 | 0 | 1 | 339 | 1 | 338 | Os03g0201400 [Oryza sativa Japonica Group] |
| RefSeq | NP_001130600.1 | 0 | 1 | 338 | 254 | 591 | hypothetical protein LOC100191699 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 7e-26 | 6 | 278 | 24 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1xyz_B | 2e-22 | 7 | 251 | 51 | 305 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 2e-22 | 7 | 251 | 51 | 305 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1ta3_B | 9e-21 | 3 | 251 | 23 | 268 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1v0n_A | 1e-20 | 6 | 251 | 25 | 266 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX266128 | 297 | 10 | 305 | 0 |
| FL854687 | 248 | 84 | 329 | 0 |
| FL870567 | 251 | 81 | 329 | 0 |
| EC894228 | 195 | 145 | 338 | 0 |
| EE175963 | 200 | 140 | 338 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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