| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g75610.1 |
| Family | GH14 |
| Protein Properties | Length: 574 Molecular Weight: 62148 Isoelectric Point: 5.7866 |
| Chromosome | Chromosome/Scaffold: 1 Start: 72493249 End: 72496562 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 112 | 529 | 0 |
| FVMMPLDTVRKDGSALNRRKAMQASLAALKSAGAEGIMVDVWWGIAESEAPGQYNFAGYIELMELAKKAGLKVQAVMSFHQCGGNVGDSVNIPLPKWVIE EMDKDQDLAYTDRCGRRNYEYISLGADALPALKGRTPIQCYADFMRAFRDHMAPYMGNTIVEIQVGMGPAGELRYPSYPESNGTWSFPGIGEFQCYDRYM LSSLKAAAESVGKPEWGNAGPGDSGSYNQWPEDTNFFRREGGWNTEYGQFFMSWYSQMLLEHGERILSATSSVYTGTPGVKVSVKVAGIHWHYGTRSHAP ELTAGYYNTRNHDGYQPIARMLGRHGAVLNFTCVEMRNHEQPQDAQCMPENLVQQVANAAKEAGIGLAGENALPRYDETAHDQVLATAAEKAEEERMVAF TYLRMGPDLFQPDNWRRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 574 Download |
| MALNMSTQTG AAAMTVARPG SRPGSRPGTP GSSRTALLSA GASSSTAVPA PNAAQLLKMQ 60 AQTMEPAAPQ AADIDKACQA LVDGAAAPGA DQGAEHADVA GVEARKVGVP VFVMMPLDTV 120 RKDGSALNRR KAMQASLAAL KSAGAEGIMV DVWWGIAESE APGQYNFAGY IELMELAKKA 180 GLKVQAVMSF HQCGGNVGDS VNIPLPKWVI EEMDKDQDLA YTDRCGRRNY EYISLGADAL 240 PALKGRTPIQ CYADFMRAFR DHMAPYMGNT IVEIQVGMGP AGELRYPSYP ESNGTWSFPG 300 IGEFQCYDRY MLSSLKAAAE SVGKPEWGNA GPGDSGSYNQ WPEDTNFFRR EGGWNTEYGQ 360 FFMSWYSQML LEHGERILSA TSSVYTGTPG VKVSVKVAGI HWHYGTRSHA PELTAGYYNT 420 RNHDGYQPIA RMLGRHGAVL NFTCVEMRNH EQPQDAQCMP ENLVQQVANA AKEAGIGLAG 480 ENALPRYDET AHDQVLATAA EKAEEERMVA FTYLRMGPDL FQPDNWRRFA AFVKRMTETG 540 VRDVCREQVE REAEGVAHAT QPLVHEAAAA LRN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-137 | 109 | 543 | 441 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 9.0e-144 | 112 | 532 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN00197 | PLN00197 | 0 | 72 | 571 | 507 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 108 | 542 | 435 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 109 | 536 | 435 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29617.1 | 0 | 1 | 573 | 1 | 572 | beta-amylase [Zea mays] |
| GenBank | EAY88485.1 | 0 | 57 | 573 | 45 | 556 | hypothetical protein OsI_09956 [Oryza sativa Indica Group] |
| RefSeq | NP_001048926.1 | 0 | 57 | 573 | 46 | 557 | Os03g0141200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148159.1 | 0 | 57 | 573 | 58 | 573 | beta-amylase [Zea mays] |
| RefSeq | XP_002468533.1 | 0 | 73 | 573 | 68 | 564 | hypothetical protein SORBIDRAFT_01g047500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 109 | 563 | 12 | 461 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1q6c_A | 0 | 109 | 563 | 12 | 461 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 109 | 563 | 12 | 461 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 109 | 563 | 12 | 461 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 109 | 563 | 12 | 461 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 410 | 168 | 572 | 0 |
| HO826564 | 406 | 166 | 567 | 0 |
| BU103692 | 435 | 108 | 542 | 0 |
| HO593646 | 442 | 131 | 568 | 0 |
| HO624546 | 445 | 131 | 571 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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