| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g03210.1 |
| Family | CE8 |
| Protein Properties | Length: 165 Molecular Weight: 17969.3 Isoelectric Point: 7.8742 |
| Chromosome | Chromosome/Scaffold: 2 Start: 2321560 End: 2322365 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 51 | 152 | 1.3e-29 |
| ISVNPNGQANFDTVQSAIDAVPANNPGWIRIHVASGVYREKVTIPMNKTFIMLEGDGRENTSIEWDDYNSTDHSHHRNVHVDATATFDCSADNFIARSIS FK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 165 Download |
| MGLMHHRLIF LALLVFVAVG HATTAPRPAG AVIKRAPSQL SVVARIIVRN ISVNPNGQAN 60 FDTVQSAIDA VPANNPGWIR IHVASGVYRE KVTIPMNKTF IMLEGDGREN TSIEWDDYNS 120 TDHSHHRNVH VDATATFDCS ADNFIARSIS FKQIGSGHSM QNLD* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 3.0e-21 | 48 | 152 | 105 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-24 | 49 | 152 | 105 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 2.0e-28 | 47 | 152 | 106 | + putative pectinesterase | ||
| PLN02480 | PLN02480 | 1.0e-29 | 49 | 152 | 104 | + Probable pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-30 | 49 | 151 | 103 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN67070.1 | 4e-24 | 34 | 152 | 31 | 134 | hypothetical protein [Vitis vinifera] |
| EMBL | CAN79494.1 | 1e-22 | 51 | 151 | 32 | 122 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI39604.1 | 1e-25 | 34 | 152 | 236 | 339 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277623.1 | 2e-24 | 34 | 152 | 31 | 134 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002455508.1 | 2e-26 | 46 | 157 | 38 | 143 | hypothetical protein SORBIDRAFT_03g012410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.000000006 | 50 | 152 | 8 | 104 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.00002 | 47 | 163 | 1 | 97 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
