Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g11410.1 |
Family | GH3 |
Protein Properties | Length: 822 Molecular Weight: 88387.5 Isoelectric Point: 5.2662 |
Chromosome | Chromosome/Scaffold: 2 Start: 9677224 End: 9680088 |
Description | beta-xylosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 97 | 358 | 0 |
AEQRVGLPRYMWWGEALHGVSDTNPGGTRFGDVVPGATSFPLVLNSAAAFNETLWRAIGGATSTEIRAMYNLGHAELTYWSPNINVVRDPRWGRASETPG EDPFLVGRFAVSFVRAMQDIDDGANAGAGAADPFARRLKVSSCCKHYAAYDVDKWFGADRLSFDANVQERDMVETFERPFEMCVRDGDASCVMCSYNRIN GVPACANGRLLTGTVRRDWQLHGYIVSDCDSVRVMVRDAKWLGYDGVQATAAAMKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 822 Download |
MASSSLRHCV VLLAASLLLC VVSVAFASDS VLGPITTNGR NYTKVCDPAR FASLGLDMAG 60 FRYCDASLPY AERVRDLVGR LTLEEKVANL GDQAKGAEQR VGLPRYMWWG EALHGVSDTN 120 PGGTRFGDVV PGATSFPLVL NSAAAFNETL WRAIGGATST EIRAMYNLGH AELTYWSPNI 180 NVVRDPRWGR ASETPGEDPF LVGRFAVSFV RAMQDIDDGA NAGAGAADPF ARRLKVSSCC 240 KHYAAYDVDK WFGADRLSFD ANVQERDMVE TFERPFEMCV RDGDASCVMC SYNRINGVPA 300 CANGRLLTGT VRRDWQLHGY IVSDCDSVRV MVRDAKWLGY DGVQATAAAM KAGLDLDCGM 360 FWEGAKDFFT AYGLQAVRQG KLKEAEVDEA LGHLYLTLMR LGFFDGSPEF QSLGASDVCT 420 EEHKEMAAEA ARQGMVLLKN DHDRLPLDAN KVNSLALVGL LQHINATDVM LGDYRGKPCR 480 VVTPYEAIRK VVSGTSMQAC DKGACGTTAL GAAIAAKTVD ATIVITGLNM SVEREGNDRE 540 DLLLPWDQTQ WINAVAEASR DPITLVIISA GGVDISFAQN NPKIGAILWA GYPGEEGGTG 600 IADVLFGKYN PGGRLPLTWY KNEYIGKLPM TSMALRPVAD KGYPGRTYKF YSGPDVLYPF 660 GHGLSYTNFT YDSYTTGASV TVKIGTAWED SCKNLTYKPG TTASTAPCPA INVAGHGCQE 720 EVSFTLKVSN TGGIGGSHVV PVYTAPPAEV DDAPLKQLVA FRRMFVPAGD AVEVPFTLSV 780 CKAFAIVEGT AYTVVPAGVS RVLVGDESLS FSFPVKIDLV A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-42 | 85 | 478 | 399 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-51 | 82 | 390 | 335 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-52 | 435 | 667 | 241 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 8.0e-66 | 128 | 780 | 700 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 61 | 812 | 760 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB55751.1 | 0 | 33 | 821 | 34 | 816 | putative alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I [Oryza sativa Japonica Group] |
GenBank | EEE54394.1 | 0 | 33 | 821 | 34 | 774 | hypothetical protein OsJ_01415 [Oryza sativa Japonica Group] |
RefSeq | NP_001068511.1 | 0 | 13 | 819 | 20 | 814 | Os11g0696400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146482.1 | 0 | 34 | 819 | 51 | 833 | hypothetical protein LOC100280070 [Zea mays] |
RefSeq | XP_002455502.1 | 0 | 32 | 819 | 37 | 823 | hypothetical protein SORBIDRAFT_03g012290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 74 | 779 | 7 | 697 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u48_A | 0 | 74 | 779 | 7 | 697 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_B | 0 | 74 | 779 | 7 | 697 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_A | 0 | 74 | 779 | 7 | 697 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2x41_A | 9.99967e-42 | 72 | 813 | 2 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |