Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g16900.1 |
Family | AA5 |
Protein Properties | Length: 613 Molecular Weight: 66317.7 Isoelectric Point: 6.3592 |
Chromosome | Chromosome/Scaffold: 2 Start: 14941597 End: 14943435 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 67 | 612 | 0 |
PTGDPSKVSQDTIVLPVDTDDDKPDGAWSIVSDNSGVSAMHMAVMRHGRAVMFDTSTTGRSLMRLRQDNCRVDPRAKKPGTADCWAHAVEFDYARGAIRP LKILTDTWCSSGAFDADGNLVQTGGYFDGDKAVRYLSPCSKCDWKEHPRSFADGRWYATQQVLPDGRFIVFGGRRSFSYEFVPKPGLTNHQSIPLPFLRE TTDDVENNLYPFVNLLPDGSLFVFANDRGIILDHRAELVIREVPPLLGGARNYPGSAMSALLPLDLRNKLHGADPEPEVIICGGAPKTAFKVGENNTFLP ALKDCARINLANPGSRWAVEDMPVGRVMGDMLILPTGDLLILSGAARGCSGWGFARQPVLTPLLYTPHAPMGTRFRPLVASTIARVYHSTAALLPDATVL VAGGNTNAAYNFSGVDFPTEVRVERFAPPYLDRALAANRPVIDALSMPGDGMRYGARFAFRFTTPVEPVVEADVKVTMYAPPFTTHGYSMNQRLLVLSMS LFVANGLGYAVTVDAPGKPELAPPGFYLLFVVAKDVPSAAAWVKIQ |
Full Sequence |
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Protein Sequence Length: 613 Download |
MGSSSQAAVL AMLLLISSST AQASFFDPFN IFRAGDFFGD EPTPPTRSER EETGASADTM 60 GLTKVPPTGD PSKVSQDTIV LPVDTDDDKP DGAWSIVSDN SGVSAMHMAV MRHGRAVMFD 120 TSTTGRSLMR LRQDNCRVDP RAKKPGTADC WAHAVEFDYA RGAIRPLKIL TDTWCSSGAF 180 DADGNLVQTG GYFDGDKAVR YLSPCSKCDW KEHPRSFADG RWYATQQVLP DGRFIVFGGR 240 RSFSYEFVPK PGLTNHQSIP LPFLRETTDD VENNLYPFVN LLPDGSLFVF ANDRGIILDH 300 RAELVIREVP PLLGGARNYP GSAMSALLPL DLRNKLHGAD PEPEVIICGG APKTAFKVGE 360 NNTFLPALKD CARINLANPG SRWAVEDMPV GRVMGDMLIL PTGDLLILSG AARGCSGWGF 420 ARQPVLTPLL YTPHAPMGTR FRPLVASTIA RVYHSTAALL PDATVLVAGG NTNAAYNFSG 480 VDFPTEVRVE RFAPPYLDRA LAANRPVIDA LSMPGDGMRY GARFAFRFTT PVEPVVEADV 540 KVTMYAPPFT THGYSMNQRL LVLSMSLFVA NGLGYAVTVD APGKPELAPP GFYLLFVVAK 600 DVPSAAAWVK IQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 2.0e-24 | 505 | 611 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-28 | 502 | 611 | 111 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-120 | 106 | 350 | 248 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY98991.1 | 0 | 24 | 612 | 25 | 621 | hypothetical protein OsI_20949 [Oryza sativa Indica Group] |
RefSeq | NP_001043851.1 | 0 | 47 | 612 | 61 | 623 | Os01g0677000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001056298.1 | 0 | 24 | 612 | 26 | 622 | Os05g0559000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148082.1 | 0 | 1 | 612 | 1 | 619 | glyoxal oxidase [Zea mays] |
RefSeq | XP_002440240.1 | 0 | 1 | 611 | 1 | 619 | hypothetical protein SORBIDRAFT_09g028310 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 0.000000000001 | 172 | 611 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 0.000000000003 | 172 | 611 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 0.000000000005 | 172 | 611 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz1_A | 0.000000000005 | 172 | 611 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2jkx_A | 0.000000000005 | 172 | 611 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |