| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g18810.1 |
| Family | GT5 |
| Protein Properties | Length: 922 Molecular Weight: 104028 Isoelectric Point: 6.2934 |
| Chromosome | Chromosome/Scaffold: 2 Start: 16650200 End: 16658218 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 429 | 911 | 0 |
| HIAHIAAEMAPVAKVGGLADVISGLAKALQKKGHLVEIILPKYDCMQLDQVNNLKALDVLLQSYFEGSMFNNKIWTGTVEGLPVYFIEPQHPSKFFWRAQ YYGEHDDFKRFSYFSRAALELLYQSGKKVDIIHCHDWQTAFVAPLYWDVYANLGFNSARICFTCHNFEYQGTAPARDLAWCGLDVEHLDRPDRMRDNSHG RINVVKGAIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKVHSRKFLGILNGIDTDTWNPSTDRYLKVQYNANDLQGKAANKAALRKQLNLASAYPSQPLV GCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQKEFEGIADHFQNNNNIRLILKYDDALSHCIYAASDMFIVPSIFEPCGLTQMIAMRYGSV PIVRKTGGLNDSVFDFDDETIPIEVRNGFTFVKADEQGLSSAMERAFNCYTRKPEVWKQLVQKDMMIDFSWDTSASQYEDIYQ | |||
| Full Sequence |
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| Protein Sequence Length: 922 Download |
| MACASAAGVE ATALLLPRAR LAAASPVAAG HRLSLTPRRT RQRTSLRTAA QRPQKSTTGA 60 DPLNGANNVQ REEAAVSTDK ERQKKYDDGD GISNLQLEDL VGMIQNTEKN ILLLNQARLQ 120 ALEHADKILK EKEALQRKIT ILETRLSETD AQLKLSAEGN FDTEINDSPL VLEFDVLKEE 180 NMLLKEDIEF LKTKLIEVAE TEESILKLEK ERALLDASLR ELESRFIAAQ ADTLKLGPRK 240 YDTWWDKVEK LEDLLENTAN QVEHAAMILD HNHDLQDKLD KLQASLRAAT ISKFSCDLVD 300 LLQQKVKSVE ERFQACNHEM HSQIELYEHS IVEFHETLSK LIEESEKRSL ENFTGNMPSE 360 LWSRISLLID GWLLEKKISY NDANMLREMA WKRDSRLREA YLSCRGTENG EVMDKFIKMA 420 LPGTSSGLHI AHIAAEMAPV AKVGGLADVI SGLAKALQKK GHLVEIILPK YDCMQLDQVN 480 NLKALDVLLQ SYFEGSMFNN KIWTGTVEGL PVYFIEPQHP SKFFWRAQYY GEHDDFKRFS 540 YFSRAALELL YQSGKKVDII HCHDWQTAFV APLYWDVYAN LGFNSARICF TCHNFEYQGT 600 APARDLAWCG LDVEHLDRPD RMRDNSHGRI NVVKGAIVYS NIVTTVSPTY ALEVRSEGGR 660 GLQDTLKVHS RKFLGILNGI DTDTWNPSTD RYLKVQYNAN DLQGKAANKA ALRKQLNLAS 720 AYPSQPLVGC ITRLVPQKGV HLIRHAIYKT AELGGQFVLL GSSPVPHIQK EFEGIADHFQ 780 NNNNIRLILK YDDALSHCIY AASDMFIVPS IFEPCGLTQM IAMRYGSVPI VRKTGGLNDS 840 VFDFDDETIP IEVRNGFTFV KADEQGLSSA MERAFNCYTR KPEVWKQLVQ KDMMIDFSWD 900 TSASQYEDIY QRAAARARAA A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 8.0e-145 | 428 | 910 | 490 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 44 | 911 | 889 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 428 | 911 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 429 | 911 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 0 | 428 | 911 | 485 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK97773.1 | 0 | 1 | 912 | 1 | 905 | starch synthase isoform IV [Triticum aestivum] |
| GenBank | ABD64538.1 | 0 | 1 | 912 | 1 | 905 | starch synthase IV [Triticum aestivum] |
| RefSeq | NP_001056142.1 | 0 | 15 | 911 | 13 | 905 | Os05g0533600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123590.1 | 0 | 1 | 912 | 1 | 900 | starch synthase IV [Zea mays] |
| RefSeq | XP_002440128.1 | 0 | 1 | 911 | 1 | 899 | hypothetical protein SORBIDRAFT_09g026570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 428 | 912 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 428 | 912 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 428 | 912 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 428 | 912 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 428 | 912 | 1 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GO851132 | 331 | 503 | 833 | 0 |
| CB622719 | 296 | 507 | 802 | 0 |
| GO882681 | 278 | 506 | 783 | 0 |
| GO879782 | 276 | 636 | 911 | 0 |
| GO882681 | 48 | 786 | 833 | 1e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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