| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g23720.1 |
| Family | GH3 |
| Protein Properties | Length: 621 Molecular Weight: 67228.7 Isoelectric Point: 5.4549 |
| Chromosome | Chromosome/Scaffold: 2 Start: 21415041 End: 21420421 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 90 | 325 | 0 |
| LSSRLAVPILYGTDAVHGHNNVFGATVFPHNVGLGASRDPELVRKIGVVTALEVRATGIHWAFAPCLAVCRDPRWGRCYESYSEDPETVRSLTTIVTGLQ GQPPGDHPHGYPFLASVRENVLACPKHFVGDGGTDKGINEGNAICSQEDLEAIHMRPYPDCITQGAATVMASYSHWNGEPLHSSHYLLTDVLKGKLGFKG FVVSDWEGIDRLCEPRGSDYRYCIAQSVNAGMDMIM | |||
| Full Sequence |
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| Protein Sequence Length: 621 Download |
| MAAAAAQGAG PLYKDASAPV ETRVRDLLGR MTLREKAAQM AQIERTVASP RALAELAAGS 60 VLNAGGSAPR DCASPADWAH MVDDMQRLAL SSRLAVPILY GTDAVHGHNN VFGATVFPHN 120 VGLGASRDPE LVRKIGVVTA LEVRATGIHW AFAPCLAVCR DPRWGRCYES YSEDPETVRS 180 LTTIVTGLQG QPPGDHPHGY PFLASVRENV LACPKHFVGD GGTDKGINEG NAICSQEDLE 240 AIHMRPYPDC ITQGAATVMA SYSHWNGEPL HSSHYLLTDV LKGKLGFKGF VVSDWEGIDR 300 LCEPRGSDYR YCIAQSVNAG MDMIMIPHRF EKFLEDLVFL VEAGEIPMSR IDDAVERILR 360 VKFISGVFEH PFSDPSLLDI IGCKEHRLLA REAVRKSLVL LKNGKNQKET FLPLPKNAKR 420 ILVAGTHADN IGYQCGGWTI AWHGNSGRIT LGTSILEAIQ ESVGVETEVM HEECPTEATI 480 DTGEFAYAVV VVGEVPYAEG LGDRSDLSIP FNGSDLITRV ASKIPTLVIV ISGRPLVIEP 540 QVLEKVDALV AAWLPGSEGM GITDCLFGDY DFVGTLPVTW FRSADQLPIN VGGANYDPLF 600 PLGYGLKIFK SDVELAQSHH * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 4.0e-38 | 15 | 581 | 608 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-51 | 398 | 606 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 8.0e-83 | 24 | 617 | 672 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-87 | 32 | 361 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 1.0e-93 | 31 | 463 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79317.1 | 0 | 19 | 612 | 13 | 606 | hypothetical protein OsI_20160 [Oryza sativa Indica Group] |
| GenBank | EEE63918.1 | 0 | 19 | 612 | 13 | 606 | hypothetical protein OsJ_18743 [Oryza sativa Japonica Group] |
| RefSeq | NP_001145784.1 | 0 | 1 | 612 | 1 | 615 | hypothetical protein LOC100279291 [Zea mays] |
| RefSeq | XP_002279757.1 | 0 | 1 | 611 | 105 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313393.1 | 0 | 12 | 606 | 7 | 594 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 12 | 606 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iex_A | 0 | 12 | 606 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iew_A | 0 | 12 | 606 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iev_A | 0 | 12 | 606 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1ieq_A | 0 | 12 | 606 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO800387 | 339 | 175 | 513 | 0 |
| GO876678 | 318 | 239 | 556 | 0 |
| GO889604 | 283 | 315 | 597 | 0 |
| GT822837 | 253 | 358 | 610 | 0 |
| GO876678 | 19 | 559 | 577 | 4.8 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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