| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g26600.1 |
| Family | GH2 |
| Protein Properties | Length: 980 Molecular Weight: 110545 Isoelectric Point: 6.3791 |
| Chromosome | Chromosome/Scaffold: 2 Start: 25278631 End: 25286856 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 42 | 769 | 0 |
| TSATAPWMHAAVPGTVLGTLLKNKLIPDPFYGLNNQAIIDIADSGREHYTFWFFTTFQCAPVGNQHVSLNFRGINYSAEVYLNGHEEVLPKGMFRRHTLD ITDVLHPDGNNLLAVLVHPPDHPGTIPPGGGQGGDHEIGKDVATQYVEGWDWICPIRDRNTGIWDEVSISITGPLKIADPHLVSTFHDDFKRSYLHCTLQ LENKSSWSADCTLKIQVSTEVEGNVCLVEHLQNYAITINPHSVLEYTIPPLFFYKPNLWWPNGMGKQSLYNVEISIDINGFGESDSWSHYFGFRKIESTI DDSTGGRIFKVNGEPIFIRGGNWILSDGLLRLTKKRYMTDIKFHADMNFNMIRCWGGGLAERPDFYHFCDVYGLMVWQEFWITGDVDGRGVPVSNPDGPL DHGLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKTLKNDLKLHPMFISYQRTKAQKICLSQDSSDPSKYLDGTRVYVQGSMWDGFANGKGGWSDG PYEIQYPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPPEGWNIPIFKKNIDGYIKEIPNPIWDYHKYIPYSKPGKVHDQIELYGRPEDLDDFCEKAQ LVNYVQYRALLEGWTSFMWTKFTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAEPIHVQLNLASFFIEVVNTTSNELTNVAVEISIWDLDGASP YYKVTEKMVVPPKKVKQIMEMEYPKMKN | |||
| Full Sequence |
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| Protein Sequence Length: 980 Download |
| MSAAEAAAAV GKRVLDTGWL AARSTEVALT GVELTTTHPP DTSATAPWMH AAVPGTVLGT 60 LLKNKLIPDP FYGLNNQAII DIADSGREHY TFWFFTTFQC APVGNQHVSL NFRGINYSAE 120 VYLNGHEEVL PKGMFRRHTL DITDVLHPDG NNLLAVLVHP PDHPGTIPPG GGQGGDHEIG 180 KDVATQYVEG WDWICPIRDR NTGIWDEVSI SITGPLKIAD PHLVSTFHDD FKRSYLHCTL 240 QLENKSSWSA DCTLKIQVST EVEGNVCLVE HLQNYAITIN PHSVLEYTIP PLFFYKPNLW 300 WPNGMGKQSL YNVEISIDIN GFGESDSWSH YFGFRKIEST IDDSTGGRIF KVNGEPIFIR 360 GGNWILSDGL LRLTKKRYMT DIKFHADMNF NMIRCWGGGL AERPDFYHFC DVYGLMVWQE 420 FWITGDVDGR GVPVSNPDGP LDHGLFLLCA RDTVKLLRNH ASLALWVGGN EQVPPVDINK 480 TLKNDLKLHP MFISYQRTKA QKICLSQDSS DPSKYLDGTR VYVQGSMWDG FANGKGGWSD 540 GPYEIQYPES FFKDSFYKYG FNPEVGSVGV PVAATIRATM PPEGWNIPIF KKNIDGYIKE 600 IPNPIWDYHK YIPYSKPGKV HDQIELYGRP EDLDDFCEKA QLVNYVQYRA LLEGWTSFMW 660 TKFTGVLIWK TQNPWTGLRG QFYDHLQDQT AGFYGCRCAA EPIHVQLNLA SFFIEVVNTT 720 SNELTNVAVE ISIWDLDGAS PYYKVTEKMV VPPKKVKQIM EMEYPKMKNA KPVYFLLLKL 780 VRLSDKEVLS RNFYWLHLPG KDYKLLEQYR QKTVPLKIGS KVYVSGRAYT VRMSIENRSN 840 KSTAESATSV STMDLVDGNG SNSISEETIC EGQETGLWSK IRRGIDLARS GDKPRTVEVN 900 GTDSGVAFFL HFSVHNSESS TQENYRDTRI LPVHYSDNYF SLTPGEKMTV DISFEAPEGS 960 VPRVILRGWN YHLYHAVTM* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK10150 | PRK10150 | 0.002 | 92 | 471 | 422 | + beta-D-glucuronidase; Provisional |
| pfam02837 | Glyco_hydro_2_N | 8.0e-8 | 91 | 159 | 70 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. |
| PRK10340 | ebgA | 2.0e-11 | 105 | 471 | 388 | + cryptic beta-D-galactosidase subunit alpha; Reviewed |
| pfam00703 | Glyco_hydro_2 | 2.0e-12 | 218 | 335 | 118 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| COG3250 | LacZ | 3.0e-33 | 52 | 677 | 654 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79162.1 | 0 | 10 | 979 | 16 | 985 | hypothetical protein OsI_19836 [Oryza sativa Indica Group] |
| RefSeq | NP_001055444.1 | 0 | 11 | 979 | 16 | 984 | Os05g0391500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002319539.1 | 0 | 8 | 977 | 2 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002439742.1 | 0 | 7 | 979 | 2 | 978 | hypothetical protein SORBIDRAFT_09g019350 [Sorghum bicolor] |
| RefSeq | XP_002512381.1 | 0 | 8 | 977 | 2 | 972 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 6 | 796 | 30 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 6 | 796 | 30 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 6 | 796 | 30 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO847639 | 346 | 524 | 869 | 0 |
| GO871600 | 333 | 307 | 639 | 0 |
| ES793920 | 382 | 380 | 757 | 0 |
| GO848159 | 317 | 176 | 492 | 0 |
| GT048436 | 338 | 565 | 901 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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