Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g27930.1 |
Family | CE8 |
Protein Properties | Length: 565 Molecular Weight: 60562.8 Isoelectric Point: 6.8742 |
Chromosome | Chromosome/Scaffold: 2 Start: 26988963 End: 26992484 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 248 | 545 | 0 |
VTVDQGGAGNYTTVGDAVAAAPTNLNGSGGYYLIYVLTGVYEENVVVPKKMKYIMMIGEGIGQTVITGNRSVVDGWTTFQSATVAVHGQGFVAMNMTFRN TAGPAKHQAVALRSSADLSTFYSCSFEAYQDTLYTHSLRQFYRGCEIYGTVDYVFGNAAVVFQDCDFYSRLPMQGQSNTVTAQGRTNPEQNTGTSIQGCR LAAAPELAANAAFTTVTYLGRPWKNFSRTVVMESYLGALVDGTGWMPWSGDFALDTLYYAEYNNSGPGADTSRRVKWPGYHVLGDGADAGNFTVNNMV |
Full Sequence |
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Protein Sequence Length: 565 Download |
MTVHYSAAVA VVLLLSLLSH SRSSSDAPPS TPVSPSAACN ATTDPTFCRT VLPPHGTSDL 60 YTYGRFSVAK SLASATKFVG LVDRYLARHR HLSRSAVGAL QDCRLLAGLN VDFLSATGAA 120 LNDTTADDAL LDTRGADDVQ TLLSAILTNQ ETCIDGLQAA SGAWSDRGDG GLASPIDNGT 180 KLYSLSLSLF TRAWVKEEPA EKRHHGHKGH RTKPPSRRRG LFDARDEVMV RRMAIEGPQG 240 TVAVNRAVTV DQGGAGNYTT VGDAVAAAPT NLNGSGGYYL IYVLTGVYEE NVVVPKKMKY 300 IMMIGEGIGQ TVITGNRSVV DGWTTFQSAT VAVHGQGFVA MNMTFRNTAG PAKHQAVALR 360 SSADLSTFYS CSFEAYQDTL YTHSLRQFYR GCEIYGTVDY VFGNAAVVFQ DCDFYSRLPM 420 QGQSNTVTAQ GRTNPEQNTG TSIQGCRLAA APELAANAAF TTVTYLGRPW KNFSRTVVME 480 SYLGALVDGT GWMPWSGDFA LDTLYYAEYN NSGPGADTSR RVKWPGYHVL GDGADAGNFT 540 VNNMVLGDNW LPQTGVPFTS GFDH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 1.0e-141 | 139 | 561 | 428 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 5.0e-142 | 139 | 561 | 425 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-176 | 248 | 548 | 301 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 39 | 561 | 536 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 39 | 561 | 549 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT38097.1 | 0 | 1 | 562 | 1 | 558 | putative pectinesterase [Oryza sativa Japonica Group] |
GenBank | EEE63420.1 | 0 | 1 | 562 | 1 | 574 | hypothetical protein OsJ_18232 [Oryza sativa Japonica Group] |
RefSeq | NP_001042865.1 | 0 | 36 | 563 | 38 | 557 | Os01g0311800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440965.1 | 0 | 25 | 562 | 23 | 571 | hypothetical protein SORBIDRAFT_09g017920 [Sorghum bicolor] |
RefSeq | XP_002457749.1 | 0 | 30 | 562 | 36 | 563 | hypothetical protein SORBIDRAFT_03g012820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 250 | 562 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 241 | 562 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 4e-18 | 245 | 552 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 4e-18 | 245 | 552 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 4e-18 | 245 | 552 | 5 | 339 | A Chain A, Pectin Methylesterase From Carrot |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |