| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g41590.2 |
| Family | GT5 |
| Protein Properties | Length: 571 Molecular Weight: 63212.8 Isoelectric Point: 6.9892 |
| Chromosome | Chromosome/Scaffold: 2 Start: 41879239 End: 41884871 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 79 | 566 | 0 |
| IIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDTNVLVEVNVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGAKLYG PTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTAVLPCYLKSIYKQNGIYENAKVAFCIHNIAYQGRFPSADFELLNLPE CFMPSFDFIDGHIKPVVGRKINWMKAGITECDLVLTVSPHYVKELTSGPEKGVELDSILRTKTLETGIVNGMDIHDWNPATDKYISVKYNAATVTEARAL NKEMLQAEVGLPVDSSIPVVIFIGRLEEQKGSDILIAAIPEFVEENVQIIVLGTGKKKMEEELMLLEAKYPQNARGIAKFNVPLARMMFAGADFIIIPSR FEPCGLIQLQGMRYGVVPICSSTGGLVDTVEEGATGFHMGSFNVEFETVDPADVTAVASNVTRALKQYKTPAFHAMVQNCMAQDLSWK | |||
| Full Sequence |
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| Protein Sequence Length: 571 Download |
| MGSVSTYCSY QTNSVGAFKQ SPHVQFQQCC HKGVRFLNNE SLSVRNKTHM TKTIATKNET 60 RPSPGRSWAP IVCSTGMPII FVATEVHPWC KTGGLGDVVG GLPPALAAMG HRVMTIAPRY 120 DQYKDTWDTN VLVEVNVGDR TETVRFFHCY KRGVDRVFVD HPMFLEKVWG KTGAKLYGPT 180 TGTDFRDNQL RFCLLCLAAL EAPRVLNLNN SEYFSGPYGE NVVFVANDWH TAVLPCYLKS 240 IYKQNGIYEN AKVAFCIHNI AYQGRFPSAD FELLNLPECF MPSFDFIDGH IKPVVGRKIN 300 WMKAGITECD LVLTVSPHYV KELTSGPEKG VELDSILRTK TLETGIVNGM DIHDWNPATD 360 KYISVKYNAA TVTEARALNK EMLQAEVGLP VDSSIPVVIF IGRLEEQKGS DILIAAIPEF 420 VEENVQIIVL GTGKKKMEEE LMLLEAKYPQ NARGIAKFNV PLARMMFAGA DFIIIPSRFE 480 PCGLIQLQGM RYGVVPICSS TGGLVDTVEE GATGFHMGSF NVEFETVDPA DVTAVASNVT 540 RALKQYKTPA FHAMVQNCMA QDLSWKVGKL * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 1.0e-75 | 75 | 566 | 508 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 6.0e-104 | 77 | 565 | 511 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-129 | 77 | 565 | 506 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 7.0e-162 | 79 | 566 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 77 | 567 | 496 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF14233.1 | 0 | 1 | 566 | 1 | 561 | AF109395_1 granule-bound starch synthase GBSSII [Triticum aestivum] |
| GenBank | ACY56072.1 | 0 | 1 | 566 | 5 | 570 | granule-bound starch synthase II [Oryza sativa Japonica Group] |
| GenBank | ACY56079.1 | 0 | 1 | 566 | 5 | 570 | granule-bound starch synthase II [Oryza sativa Indica Group] |
| GenBank | ACY56082.1 | 0 | 1 | 566 | 5 | 570 | granule-bound starch synthase II [Oryza sativa Indica Group] |
| GenBank | EEC81906.1 | 0 | 1 | 566 | 5 | 570 | hypothetical protein OsI_25736 [Oryza sativa Indica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 77 | 566 | 10 | 498 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 77 | 566 | 10 | 498 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 77 | 567 | 1 | 464 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 77 | 567 | 1 | 464 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 77 | 567 | 1 | 464 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 541 | 27 | 566 | 0 |
| HO825853 | 482 | 85 | 566 | 0 |
| HO629148 | 532 | 35 | 566 | 0 |
| CX101131 | 333 | 234 | 566 | 0 |
| HO778340 | 364 | 71 | 433 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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