y
Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi2g48710.1 |
Family | GT8 |
Protein Properties | Length: 539 Molecular Weight: 59280.1 Isoelectric Point: 6.5821 |
Chromosome | Chromosome/Scaffold: 2 Start: 48941029 End: 48944879 |
Description | galacturonosyltransferase 15 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 173 | 510 | 1.4013e-45 |
CLALRLAEEFSANSEARSPVPLPEHAPRLTDASCIHVCLVTDNVLAAAVAVASAVRSSADPSRLVFHVVSDKKSYVPMHSWFALHPASPAVVEVKGLHQF DWRDGDAIASVMRTIDEVQRSSLDYHHCECDGSVGTGREYGRLEASKPSTFSLLNYLRIHLPEFFPELGRMILLDDDVVVRKDLAGLWEQELHGNIMGAV GAHRTSGADGDGGICIERTLGEHLNFSDAAVTSMAPSLGLHGSQCAWSWGVNIIDLEAWRRTNVTKTYQFWLQKNRESGFRLWKMSSLPPALLAFHGRVR AVEPLWHLPDLGWHMPDAELLQVSAVLHFSGPRKPWLE |
Full Sequence |
---|
Protein Sequence Length: 539 Download |
MKLYITAAAV DVDDVTKPKA APPVARRGYR SVLVTGLLAG VLLFRAALLA VEAGASLCPS 60 TTGCLGWRTG FAHWLYGGDG DATEEFMREW KRSHTEASLL DPVVVEAAPD SLDGLMAEMD 120 TILASYDRLD MEALVVKIMA MLLKMDRKVK SSRIKTLFNR HLASLGIPKS MHCLALRLAE 180 EFSANSEARS PVPLPEHAPR LTDASCIHVC LVTDNVLAAA VAVASAVRSS ADPSRLVFHV 240 VSDKKSYVPM HSWFALHPAS PAVVEVKGLH QFDWRDGDAI ASVMRTIDEV QRSSLDYHHC 300 ECDGSVGTGR EYGRLEASKP STFSLLNYLR IHLPEFFPEL GRMILLDDDV VVRKDLAGLW 360 EQELHGNIMG AVGAHRTSGA DGDGGICIER TLGEHLNFSD AAVTSMAPSL GLHGSQCAWS 420 WGVNIIDLEA WRRTNVTKTY QFWLQKNRES GFRLWKMSSL PPALLAFHGR VRAVEPLWHL 480 PDLGWHMPDA ELLQVSAVLH FSGPRKPWLE VAFPELRDLW LGHLNVSDGF LRGCSVVE* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02742 | PLN02742 | 3.0e-73 | 130 | 534 | 408 | + Probable galacturonosyltransferase | ||
cd06429 | GT8_like_1 | 1.0e-87 | 207 | 525 | 320 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
PLN02659 | PLN02659 | 3.0e-110 | 54 | 536 | 500 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 4.0e-117 | 47 | 538 | 498 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-136 | 45 | 536 | 498 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34134.1 | 0 | 87 | 538 | 1 | 436 | unknown [Zea mays] |
GenBank | EEC71413.1 | 0 | 26 | 538 | 18 | 518 | hypothetical protein OsI_03591 [Oryza sativa Indica Group] |
RefSeq | NP_001044121.1 | 0 | 1 | 538 | 1 | 536 | Os01g0727100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147797.1 | 0 | 1 | 538 | 1 | 530 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002456278.1 | 0 | 84 | 538 | 30 | 471 | hypothetical protein SORBIDRAFT_03g033400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000006 | 324 | 508 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00001 | 324 | 508 | 80 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00001 | 324 | 508 | 80 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CB656533 | 258 | 89 | 346 | 0 |
FL897009 | 250 | 232 | 481 | 0 |
FL902042 | 233 | 232 | 464 | 0 |
CA733384 | 217 | 296 | 512 | 0 |
GH207025 | 186 | 161 | 346 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|