| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g50040.1 |
| Family | GT19 |
| Protein Properties | Length: 463 Molecular Weight: 51441.9 Isoelectric Point: 8.1741 |
| Chromosome | Chromosome/Scaffold: 2 Start: 49995945 End: 50003394 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 42 | 423 | 0 |
| FVVAGEVSGDSLASRLMASIRELSPVPVRFAGVGGELMCKEGLQSLFPMEEIAIMGLWELLPHIYNVKRKIENTVDAAMLFQPHAVVTIDSKGFSFCLLQ QLKCRYNQKVDSPLHVHYVAPSFWAWKGGESRLSKLHNFVDHMLCILPFEHEICRLNGLPATYVGHPLLDDAAVLKVDPELSSDKSMHQESGEAFRLEHK LSPDATILTMLPGSRMQEVARMLPIFLRTVQHLSHTLNELSLVIPVAPHRDVRNYVENVVRSVPFPVVLIPGGSLEKRYGAFNASKAALCTSGTAVMELM LAKLPCVVAYQAHFITECFIHLRKKINFISLPNILLNSPIVPEILFRACTDKNLAAELSEVIFNDEVRQRQVGSADRMLQVL | |||
| Full Sequence |
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| Protein Sequence Length: 463 Download |
| MLSRWVAAAG RQQGLLARLR ARAYSYGRVF DAASRDGELR LFVVAGEVSG DSLASRLMAS 60 IRELSPVPVR FAGVGGELMC KEGLQSLFPM EEIAIMGLWE LLPHIYNVKR KIENTVDAAM 120 LFQPHAVVTI DSKGFSFCLL QQLKCRYNQK VDSPLHVHYV APSFWAWKGG ESRLSKLHNF 180 VDHMLCILPF EHEICRLNGL PATYVGHPLL DDAAVLKVDP ELSSDKSMHQ ESGEAFRLEH 240 KLSPDATILT MLPGSRMQEV ARMLPIFLRT VQHLSHTLNE LSLVIPVAPH RDVRNYVENV 300 VRSVPFPVVL IPGGSLEKRY GAFNASKAAL CTSGTAVMEL MLAKLPCVVA YQAHFITECF 360 IHLRKKINFI SLPNILLNSP IVPEILFRAC TDKNLAAELS EVIFNDEVRQ RQVGSADRML 420 QVLYEPIKQR GGSFVDEVRS LSSSVHSPST IAALTVLYTD KS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 3.0e-40 | 42 | 386 | 351 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 3.0e-58 | 43 | 433 | 393 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 6.0e-80 | 42 | 438 | 399 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 9.0e-105 | 39 | 423 | 385 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 1.0e-107 | 39 | 423 | 387 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71491.1 | 0 | 1 | 461 | 1 | 467 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_001044267.1 | 0 | 1 | 461 | 1 | 467 | Os01g0752600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140462.1 | 0 | 1 | 461 | 1 | 463 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | XP_002458499.1 | 0 | 21 | 461 | 1 | 443 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 5 | 457 | 9 | 464 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG864023 | 277 | 123 | 399 | 0 |
| DT652350 | 272 | 1 | 272 | 0 |
| DV519136 | 279 | 1 | 279 | 0 |
| DR962527 | 264 | 1 | 264 | 0 |
| DR969018 | 260 | 1 | 260 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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