Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g52140.1 |
Family | CE8 |
Protein Properties | Length: 550 Molecular Weight: 59383.4 Isoelectric Point: 7.1325 |
Chromosome | Chromosome/Scaffold: 2 Start: 51618432 End: 51621106 |
Description | methylesterase PCR A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 238 | 534 | 0 |
DVVVAKDGSGRYKTVKEAVDAAPENKGRRYVIRVKKGVYKENVEVGRKKRELMIVGDGMDATVITGSRNVVDGATTFNSATLAVAGDGIILQDLKIENTA GPEKHQAVALRVSADRAVISRCRVDGYQDTLYAHQLRQFYRGCFVSGTVDFVFGNAAAVLQDCTLAARRPMRAQKNAVTAQGREDPNQNTGTSLQRCRVV PGRDLAPVAQAFPTFLGRPWKAYSRTVYMQSFLGPHVDPKGWLEWDGEFALRTLFYGEYQNEGPGAGTAGRVRWPGYHVITDRAVALQFTVGKFIQG |
Full Sequence |
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Protein Sequence Length: 550 Download |
MTRSNEPLLS SPSQRDGHPC KVILVTLTLS LATLLCVVAA CFLLPNPATP DLCRSSPDPA 60 TCHAIVADAV LASQTPHPTP PVQVLRAILA RSLHQHDAAA SALAGMHRRA VSDRSGQRAP 120 LADCILLLEL ARDRLADAAV ARHEDDARTW LSAVLTDHVT CLDGLDDDDQ PLRDVVGAHL 180 EPLKSLASAS LAVLNTVSSD DARDVLQLAE AVDGFPSWVP TRDRALLEGG GERAVEADVV 240 VAKDGSGRYK TVKEAVDAAP ENKGRRYVIR VKKGVYKENV EVGRKKRELM IVGDGMDATV 300 ITGSRNVVDG ATTFNSATLA VAGDGIILQD LKIENTAGPE KHQAVALRVS ADRAVISRCR 360 VDGYQDTLYA HQLRQFYRGC FVSGTVDFVF GNAAAVLQDC TLAARRPMRA QKNAVTAQGR 420 EDPNQNTGTS LQRCRVVPGR DLAPVAQAFP TFLGRPWKAY SRTVYMQSFL GPHVDPKGWL 480 EWDGEFALRT LFYGEYQNEG PGAGTAGRVR WPGYHVITDR AVALQFTVGK FIQGGRWLKD 540 TGVDYDEGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 4.0e-148 | 207 | 549 | 358 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 2.0e-152 | 213 | 549 | 337 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 8.0e-155 | 215 | 549 | 336 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 1 | 549 | 559 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 238 | 534 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ02103.1 | 0 | 44 | 549 | 42 | 529 | pectin methylesterase [Oncidium Gower Ramsey] |
GenBank | EAY76103.1 | 0 | 1 | 549 | 1 | 546 | hypothetical protein OsI_04029 [Oryza sativa Indica Group] |
RefSeq | NP_001044480.1 | 0 | 1 | 549 | 1 | 546 | Os01g0788400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002317208.1 | 0 | 1 | 549 | 1 | 549 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002456465.1 | 0 | 1 | 549 | 1 | 552 | hypothetical protein SORBIDRAFT_03g036790 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 235 | 549 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 235 | 549 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-20 | 234 | 503 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-20 | 234 | 503 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-20 | 234 | 503 | 1 | 311 | A Chain A, Pectin Methylesterase From Carrot |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |