Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g53800.1 |
Family | AA1 |
Protein Properties | Length: 567 Molecular Weight: 62782.3 Isoelectric Point: 6.1284 |
Chromosome | Chromosome/Scaffold: 2 Start: 52885783 End: 52888122 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 548 | 0 |
AEVHHHEFIVQETPVKRLCKEHNIITVNGQFPGPTLEVREGDTLVVNVVNQAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYKFTIEGQEGT LWWHAHSSWLRATVYGALIIRPREDKAYPFEKPSREVPLMLGEWWDANPIDVIREAQRTGGGPNVSDAFTVNGQPGDLYNCSREETTAISVKPGETALLR FINSALNHELFVSIANHKMTVVGADASYTEPFVTSVLMIAPGQTTDVLVTMDQAPTRYYIAARGYVTTQGVAFDNTTTTAILEYDCGCSTDFGPAIRPAF PTLPAFNDTSAATAFAAGIKSPRKVEIPSPVDENLFFTVGLGLFNCKPGQQCGAPNNTRFTASMNNISFVFPKATSLLHAHYYDIPDVFTTDFPAYPSVQ FDYTAQNVSRSLWQPIPATKLYKLRYNSVVQIVLQDTSIVTPENHPIHLHGYDFYILAEGFGNFDAKKDAEKFNLENPPQRNTVAVPVNGWAVIRFRADN PGVWLMHCHLDVHITWGLAMAFLVED |
Full Sequence |
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Protein Sequence Length: 567 Download |
MASSRLLFLL SCSCLALALL ASAEVHHHEF IVQETPVKRL CKEHNIITVN GQFPGPTLEV 60 REGDTLVVNV VNQAQYNVTI HWHGIRQFRT GWADGPEFVT QCPIKPGGSY KYKFTIEGQE 120 GTLWWHAHSS WLRATVYGAL IIRPREDKAY PFEKPSREVP LMLGEWWDAN PIDVIREAQR 180 TGGGPNVSDA FTVNGQPGDL YNCSREETTA ISVKPGETAL LRFINSALNH ELFVSIANHK 240 MTVVGADASY TEPFVTSVLM IAPGQTTDVL VTMDQAPTRY YIAARGYVTT QGVAFDNTTT 300 TAILEYDCGC STDFGPAIRP AFPTLPAFND TSAATAFAAG IKSPRKVEIP SPVDENLFFT 360 VGLGLFNCKP GQQCGAPNNT RFTASMNNIS FVFPKATSLL HAHYYDIPDV FTTDFPAYPS 420 VQFDYTAQNV SRSLWQPIPA TKLYKLRYNS VVQIVLQDTS IVTPENHPIH LHGYDFYILA 480 EGFGNFDAKK DAEKFNLENP PQRNTVAVPV NGWAVIRFRA DNPGVWLMHC HLDVHITWGL 540 AMAFLVEDGY GKLQTLEAPP VDLPMC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-49 | 32 | 147 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 7.0e-72 | 41 | 544 | 534 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 4.0e-81 | 41 | 556 | 542 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-91 | 41 | 544 | 538 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 24 | 566 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28316.1 | 0 | 23 | 566 | 27 | 571 | unknown [Zea mays] |
GenBank | EEC71732.1 | 0 | 13 | 566 | 14 | 599 | hypothetical protein OsI_04280 [Oryza sativa Indica Group] |
RefSeq | NP_001044679.1 | 0 | 17 | 566 | 18 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148479.1 | 0 | 14 | 566 | 16 | 572 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456566.1 | 0 | 24 | 566 | 26 | 568 | hypothetical protein SORBIDRAFT_03g038550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 544 | 1 | 521 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 1asq_A | 0 | 23 | 544 | 1 | 521 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 1asp_B | 0 | 23 | 544 | 1 | 521 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 1asp_A | 0 | 23 | 544 | 1 | 521 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
PDB | 1aso_B | 0 | 23 | 544 | 1 | 521 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |