Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g56607.1 |
Family | GH35 |
Protein Properties | Length: 847 Molecular Weight: 94103.1 Isoelectric Point: 7.294 |
Chromosome | Chromosome/Scaffold: 2 Start: 54917865 End: 54923597 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 342 | 0 |
LIISGRRRLLISTSIHYPRSVPAMWPKLVAEAKDGGADCIETYVFWNGHETAPGEYYFEDRFDLVRFAKVVKDAGLYLMLRIGPFVAAEWNFGGVPVWLH YIPGAVFRTNNEPFKSHMKSFTTKIVDMMKRERFFASQGGHIILAQIENEYGDTEQAYGADGKAYAMWAASMALAQNTGVPWIMCQQYDAPEHVINTCNS FYCDQFKTNSPTKPKIWTENWPGWFQTFGESNPHRPPEDVAFSVARFFQKGGSVQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLTRLPKWAHLR DLHK |
Full Sequence |
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Protein Sequence Length: 847 Download |
MAAAPVRFLP LLLPLLLPLL LLLVAAAADS GVTYDGRSLI ISGRRRLLIS TSIHYPRSVP 60 AMWPKLVAEA KDGGADCIET YVFWNGHETA PGEYYFEDRF DLVRFAKVVK DAGLYLMLRI 120 GPFVAAEWNF GGVPVWLHYI PGAVFRTNNE PFKSHMKSFT TKIVDMMKRE RFFASQGGHI 180 ILAQIENEYG DTEQAYGADG KAYAMWAASM ALAQNTGVPW IMCQQYDAPE HVINTCNSFY 240 CDQFKTNSPT KPKIWTENWP GWFQTFGESN PHRPPEDVAF SVARFFQKGG SVQNYYVYHG 300 GTNFGRTTGG PFITTSYDYD APIDEYGLTR LPKWAHLRDL HKSIKLCEHS LLYGNLTSLS 360 LGTKQEADVY TDHSGGCVAF LANIDPENDT VVTFRSRQYD LPAWSVSILP DCKNAVFNTA 420 KVQSQTLMVD MVPETLQSTK PDRWSIFREK TGIWDKNDFI RNGFVDHINT TKDSTDYLWH 480 TTSFNVDRSY PTNGNRELLS IDSKGHAVHA FLNNELIGSA YGNGSKSSFN VHMPIKLKPG 540 KNEIALLSMT VGLQNAGPHY EWVGAGLTSV NISGMKNGSI DLSSNNWAYK IGLEGEHYGL 600 FKPDQGNNQR WSPQSEPPKG QPLTWYKVNV DVPQGDDPVG IDMQSMGKGL AWLNGNAIGR 660 YWPRTSSSDD RCTPSCNYRG PFNPSKCRTG CGKPTQRWYH VPRSWFHPSG NTLVVFEEQG 720 GDPTKITFSR RVATKVCSFV SENYPSIDLE SWDKSISDDG KDTAKVQLSC PKGKNISSVK 780 FASFGDPSGT CRSYQQGRCH HPSSLSVVEK ACLNINSCTV SLSDEGFGKD LCPGVAKTLA 840 IEADCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 1.0e-8 | 54 | 193 | 147 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-20 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-133 | 54 | 344 | 306 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 30 | 846 | 823 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG95687.1 | 0 | 28 | 846 | 102 | 919 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EEC71891.1 | 0 | 29 | 846 | 35 | 851 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
RefSeq | NP_001044964.1 | 0 | 28 | 846 | 34 | 851 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151478.1 | 0 | 30 | 846 | 27 | 844 | beta-galactosidase [Zea mays] |
RefSeq | XP_002456725.1 | 0 | 28 | 846 | 25 | 843 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1e-39 | 38 | 589 | 14 | 598 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 1e-33 | 41 | 360 | 12 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 1e-33 | 41 | 360 | 12 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |