| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g56820.1 |
| Family | CE8 |
| Protein Properties | Length: 547 Molecular Weight: 58571.2 Isoelectric Point: 6.9726 |
| Chromosome | Chromosome/Scaffold: 2 Start: 55077142 End: 55080092 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 234 | 538 | 0 |
| ATVCRDGCDYETVKEAVAAAPDDNGGGKRFVVRVKEGVYKESVSVPWEKTNLVLVGDGMGKTVITGDRNADTPGVSTFNTATVGVLADGFMARDLTIANT AGPDAHQAVAFRSTGDRTVLDAVELLGHQDTLYAHAMRQFYTRCRVSGTVDFVFGNSAALLHDTLLLVLPRQLHPEKGETDAVTAQGRTDPAQPTGIVLS RCAVNGSEEYMAMYRQKPDAHRVYLGRPWKEYSRTVFVGCALAEIVQPQGWMPWSGDFALETLYYGEYDSAGPGGGDRSRSRVKWSSQVPKEHVDVYGVA SFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 547 Download |
| MPPPPLRLLF ILLLLFHIPF SLSSGHSHSR RHRAPAPSPA TPPAASDTAP LPVLLACNAT 60 RFKPVCVSTL SAANATSTPD LLAATLSALR CRIPPAVSTA RSILSSSSSN VNLSSAATNC 120 LTLLSISSHR LSPSPAPSLI SASAALLHLY DCWSAYKYVN TSRTISDAMA YLNDAIAVSS 180 NYISMLAAQI RYGDDTSRWA PPQTERDGYW PSAAADAEAD VDALGVPRGL PADATVCRDG 240 CDYETVKEAV AAAPDDNGGG KRFVVRVKEG VYKESVSVPW EKTNLVLVGD GMGKTVITGD 300 RNADTPGVST FNTATVGVLA DGFMARDLTI ANTAGPDAHQ AVAFRSTGDR TVLDAVELLG 360 HQDTLYAHAM RQFYTRCRVS GTVDFVFGNS AALLHDTLLL VLPRQLHPEK GETDAVTAQG 420 RTDPAQPTGI VLSRCAVNGS EEYMAMYRQK PDAHRVYLGR PWKEYSRTVF VGCALAEIVQ 480 PQGWMPWSGD FALETLYYGE YDSAGPGGGD RSRSRVKWSS QVPKEHVDVY GVASFIQGDK 540 WIPKVQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 9.0e-92 | 229 | 543 | 326 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-92 | 235 | 544 | 318 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-94 | 227 | 542 | 321 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 6.0e-134 | 233 | 539 | 311 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 53 | 545 | 509 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY76707.1 | 0 | 36 | 546 | 29 | 540 | hypothetical protein OsI_04662 [Oryza sativa Indica Group] |
| RefSeq | NP_001044992.1 | 0 | 36 | 546 | 29 | 540 | Os01g0880300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002306241.1 | 0 | 40 | 543 | 40 | 555 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 26 | 543 | 29 | 561 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458861.1 | 0 | 1 | 545 | 1 | 506 | hypothetical protein SORBIDRAFT_03g041680 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 233 | 542 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 230 | 542 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-21 | 239 | 507 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-21 | 239 | 507 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-21 | 239 | 507 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
