| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi2g58616.1 |
| Family | GT41 |
| Protein Properties | Length: 983 Molecular Weight: 110130 Isoelectric Point: 6.916 |
| Chromosome | Chromosome/Scaffold: 2 Start: 56429844 End: 56438371 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 592 | 750 | 0 |
| DRTSRLRIGYVSSDFGNHPLSHLMGSVFGMHDQDTIEVFCYALSKDDGTEWRQRIQSEAEHFIDVSTMSSDMIAKVINEDKIQILINLNGYTKGARNEIF AMQPAPIQVSYMGFPGTTGASYIDYLVTDEFVSPLKFSHIYSEKLVHLPHCYFVNDYKK | |||
| GT41 | 761 | 965 | 0 |
| PHKRADYGLPEDKFIFACFNQLYKMDPDIFGTWCNIVKRVPNSALWLLRFPPAGEMRLRAYAISKGVRADQIIFTDVAAKSEHIRRSALADLFLDTPLCN GHTTGTDILWAGLPMITLPLEKMATRVAGSLCRATGIGEEMIVSSLKEYEERAVFLAKNPSKLQALTNKLKAVRMTCPLFDTSRWVKNLDRAYLKMWHLY CLGRH | |||
| Full Sequence |
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| Protein Sequence Length: 983 Download |
| MLSVRGGGVA AAGAEQRGIH PHPDHPTPWL RQHLGAAINS LPQNPLEVDE DAHLGIAQQS 60 YNAGDYRAAL EHCNAVYMVN PRRLENLLLL GAVYYQLREF DMCIVRNSEA VQIQPNFPEC 120 VNNMANAWRE KGDIDCAIQL YDHATKDKFI PTLQLRPTFA DAWANLANAY TRKGNLSKAV 180 GCYHQAIALN PRLVDAYCNL GDVLKAQGLY SDAYNCYVNA LSVEPSSANA WYYIAGLFMQ 240 WGDPSKAVLY YKEAIKYKPS FYDAHLNLGN LYKAVGMHQD AIVCYQNAVR ASPDNDIAYG 300 TLANTYYEQG QLDLAIRSYR QAINCNSSYV EAYNNLGNAL KDAGKSDEAI GCYEKCLALQ 360 PSHPQALTNL GNVYMERNMM DVAASLYMAT LTVTTGLSAP YNNLAIIYKQ QGEYDRALTC 420 YNEVLRIDPT AADCLVNRGN TLKETGRVSE AIQDYFRAIA IRPAMAEAHA NLASAYKDTG 480 LLEAAIVSYR HALQCRGDFP EATCNLLHTR QCVCDWDDRE EKFIEVEGII RRHIKNSLLP 540 SVQPFHAIAY PLDPTLALEI SKKYAAHYSM VASRFGLPKF MHPSGVPVNT GDRTSRLRIG 600 YVSSDFGNHP LSHLMGSVFG MHDQDTIEVF CYALSKDDGT EWRQRIQSEA EHFIDVSTMS 660 SDMIAKVINE DKIQILINLN GYTKGARNEI FAMQPAPIQV SYMGFPGTTG ASYIDYLVTD 720 EFVSPLKFSH IYSEKLVHLP HCYFVNDYKK KNQDALDQVC PHKRADYGLP EDKFIFACFN 780 QLYKMDPDIF GTWCNIVKRV PNSALWLLRF PPAGEMRLRA YAISKGVRAD QIIFTDVAAK 840 SEHIRRSALA DLFLDTPLCN GHTTGTDILW AGLPMITLPL EKMATRVAGS LCRATGIGEE 900 MIVSSLKEYE ERAVFLAKNP SKLQALTNKL KAVRMTCPLF DTSRWVKNLD RAYLKMWHLY 960 CLGRHPQHFK VLEDNTQIVN SP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 2.0e-30 | 31 | 506 | 578 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| pfam13844 | Glyco_transf_41 | 2.0e-68 | 597 | 750 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 1.0e-72 | 764 | 957 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 2.0e-99 | 402 | 960 | 572 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC73199.1 | 0 | 26 | 978 | 54 | 1000 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEE57013.1 | 0 | 26 | 978 | 54 | 1000 | hypothetical protein OsJ_06783 [Oryza sativa Japonica Group] |
| RefSeq | XP_002270163.1 | 0 | 47 | 976 | 59 | 980 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319130.1 | 0 | 49 | 975 | 1 | 919 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002453843.1 | 0 | 3 | 978 | 28 | 1007 | hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 361 | 748 | 6 | 390 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 4gz6_D | 0 | 745 | 969 | 495 | 718 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 4gz6_D | 2e-21 | 115 | 275 | 6 | 158 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 4gz6_D | 1e-18 | 157 | 304 | 6 | 153 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 4gz6_D | 2e-18 | 191 | 341 | 6 | 156 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795247 | 455 | 523 | 977 | 0 |
| HO778725 | 444 | 534 | 977 | 0 |
| GT034150 | 327 | 630 | 956 | 0 |
| GO881553 | 325 | 598 | 922 | 0 |
| HO795247 | 51 | 471 | 521 | 0.00000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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