Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi2g59400.1 |
Family | GT47 |
Protein Properties | Length: 412 Molecular Weight: 46419.6 Isoelectric Point: 7.1166 |
Chromosome | Chromosome/Scaffold: 2 Start: 57110070 End: 57112375 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 44 | 339 | 0 |
RLKVYVYELPTKYNKKMVAKDSRCLSHMFAAEIFMHRFLLSSAIRTMNPEEADWFYTPVYTTCDLTPWGHPLPFKSPRIMRSAIQFISSHWPYWNRTAGA DHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQKDHVCLKEGSINIPPYAPPQKMKTHLVPPETPRSIFVYFRGLFYDTANDPEGGYYARGA RASVWENFKNNPLFDISTDHPPTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVAEDDVPKLDTILTSI |
Full Sequence |
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Protein Sequence Length: 412 Download |
MGNQRAVLAL LAAAALLSCS VSAQDTERIE GSAGDVLEDD PVGRLKVYVY ELPTKYNKKM 60 VAKDSRCLSH MFAAEIFMHR FLLSSAIRTM NPEEADWFYT PVYTTCDLTP WGHPLPFKSP 120 RIMRSAIQFI SSHWPYWNRT AGADHFFVVP HDFGACFHYQ EEKAIERGIL PLLRRATLVQ 180 TFGQKDHVCL KEGSINIPPY APPQKMKTHL VPPETPRSIF VYFRGLFYDT ANDPEGGYYA 240 RGARASVWEN FKNNPLFDIS TDHPPTYYED MQRAIFCLCP LGWAPWSPRL VEAVVFGCIP 300 VIIADDIVLP FADAIPWDEI GVFVAEDDVP KLDTILTSIP MEVILRKQRL LANPSMKQAM 360 LFPQPAQPGD AFHQILNGLA RKLPHNKGVY LTPGQKALNW TQGPKGDLKP W* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-82 | 44 | 339 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG31432.1 | 0 | 2 | 411 | 6 | 419 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
RefSeq | NP_001045263.1 | 0 | 23 | 411 | 27 | 415 | Os01g0926600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130448.1 | 0 | 21 | 411 | 25 | 415 | hypothetical protein LOC100191546 [Zea mays] |
RefSeq | NP_001142343.1 | 0 | 2 | 411 | 6 | 419 | hypothetical protein LOC100274514 [Zea mays] |
RefSeq | XP_002459016.1 | 0 | 23 | 411 | 29 | 417 | hypothetical protein SORBIDRAFT_03g044520 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |