| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g13487.1 |
| Family | GH116 |
| Protein Properties | Length: 914 Molecular Weight: 100654 Isoelectric Point: 6.0867 |
| Chromosome | Chromosome/Scaffold: 3 Start: 11929207 End: 11934060 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 489 | 849 | 0 |
| GQFLYLEATEYYMYNTYDVHFYASFALLSLFPELELSLQRDFARAVLIHDPRPMVTLDGATVLRKVLGAVPHDIGLNDPWFELNAYMIHDPARWKDLNPK FVLQVYRAVVVTGNAAFAKAAWPAVYLAMAYMDQYDRDGDGMVENEGPDQTYDLWSVTGVSAYTGGIWVTALQATAAMARIVGDGDAECYFHGRYLRAKQ VYDAELWNGTYFRYDNSGGETSESIMADQLAGQWYAHVCGLEPVVEEDKARSALATVLDYNVMRVKGGAVGAVNGMRPDGGIDMSSTQSKEIWSGTTYAV AAAMVHEGMPEGAFRTAKGAHDASWGKAGFGYAFQTPEAWTAEGGYRGLHYMRPLSVWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 914 Download |
| MGSLKLEQTK AHSLIDCAQP ATRTWQRKFD DEGKKIEMFS MTMNDMILID VIYDPFKKWM 60 DNCYRGLPLG GLGAGSIGRS YRGYFQHFQI FPAIYEQKPI LANQFSAFIS RPNGKSYSTV 120 LSAPTADVLK GVDKAGIGSW DWKLKEKNCT YHALFPRSWT VYDGEPDPAI KITCRQISPF 180 IPHNYKESSF PVVVFTFTVH NTGSTPADVT LLFTWANSVG GRSELTGNHT NSKMMERDGV 240 HGVLLHHRTA NDGHPPVTFA IASQETEDVR VTDCPSFTMG SSSSGDFTAK DMWQEIKKHG 300 SFITTDKEPR ASKPGSSIGA AVAAATTVPA GGTRVVSFAL SWSCPEVKFP AGRTYHRRYT 360 TFHGLDRDAA AESLAHDALL EHMDWESKIE EWQRPILQDK RLPDWYPVAL FNELYYLNAG 420 GTIWTDGLPP KMSVSSSGVG TEPFSLATTY LPGTAVDGIL SAVASATEDQ HSAAAFGATL 480 LGDGEENVGQ FLYLEATEYY MYNTYDVHFY ASFALLSLFP ELELSLQRDF ARAVLIHDPR 540 PMVTLDGATV LRKVLGAVPH DIGLNDPWFE LNAYMIHDPA RWKDLNPKFV LQVYRAVVVT 600 GNAAFAKAAW PAVYLAMAYM DQYDRDGDGM VENEGPDQTY DLWSVTGVSA YTGGIWVTAL 660 QATAAMARIV GDGDAECYFH GRYLRAKQVY DAELWNGTYF RYDNSGGETS ESIMADQLAG 720 QWYAHVCGLE PVVEEDKARS ALATVLDYNV MRVKGGAVGA VNGMRPDGGI DMSSTQSKEI 780 WSGTTYAVAA AMVHEGMPEG AFRTAKGAHD ASWGKAGFGY AFQTPEAWTA EGGYRGLHYM 840 RPLSVWAMQW ALSPPELHKD LGLASVSPPG DAARGREKFD KVAGMLRLPE KVQHKGFFLA 900 LYHSLRQLVL PAC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-25 | 61 | 426 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-57 | 66 | 385 | 329 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 6.0e-68 | 488 | 852 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-154 | 489 | 850 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE67921.1 | 0 | 1 | 912 | 1 | 919 | hypothetical protein OsJ_25789 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060825.1 | 0 | 1 | 912 | 1 | 928 | Os08g0111200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002325943.1 | 0 | 51 | 902 | 22 | 882 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002444904.1 | 0 | 1 | 911 | 1 | 928 | hypothetical protein SORBIDRAFT_07g001140 [Sorghum bicolor] |
| RefSeq | XP_002528846.1 | 0 | 15 | 903 | 25 | 943 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EE024511 | 289 | 553 | 839 | 0 |
| DR806818 | 289 | 553 | 839 | 0 |
| FF344981 | 263 | 527 | 788 | 0 |
| FF346777 | 253 | 537 | 788 | 0 |
| EC904198 | 279 | 563 | 839 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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