Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g20550.1 |
Family | GT8 |
Protein Properties | Length: 661 Molecular Weight: 74967.6 Isoelectric Point: 9.4885 |
Chromosome | Chromosome/Scaffold: 3 Start: 19558456 End: 19564513 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 322 | 632 | 0 |
CLPLRLANEYFSLDSVQQQFPNHEKLDDPKLYHYALFSDNILATAVVVNSTVLNAKHPSRHVFHIVTDRLNYAPMKMWFLSNPPGKATIEVQNIDEFTWL NETYSPVLKQLGSQSMIDYYFRAQRANSDSNLKYRNPKYLSMLNHLRFYLPEIYPKLDKMVFLDDDVVVKKDLTGLWSIDMKGKVNGAVETCGESFHRFD RYLNFSNPVIAKNFDPHACGWAFGMNVFDLAEWRRQDITEIYHSWQKLNEDRLLWKLGTLPPGLITFWNKTFPLNRSWHVLGLGYNPHVNSRDIERAAVI HYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 661 Download |
MVCTEARPKA QRNNSAMVRT GRSVLLFLLA LTVLSPLVLY TRRLSVALNP IQRKDLPGEI 60 ANQGLGVKAS SRLNALPLET VSSLKEPVGV VFSEEPRDLS NESIESKDQE STPRKKANRA 120 LSEVTAADGA GSKEDGLIDQ VTRQEGQDGS LVSSSIDQQE KATGSQQQSS SEASSLETPA 180 KVLVENPQKE STDVKSKNMA LPDTRVRNIK DQLIKAKVYL GLGAIRANSQ YLRDLRQRIR 240 EVQKVLGDAT KDSDLPKNAN EKVKALEQTL IKGKQTQDDC SVVVKKLRAM LHSAEEQLLA 300 QKKQTVFLTQ LAAKTLPKGL HCLPLRLANE YFSLDSVQQQ FPNHEKLDDP KLYHYALFSD 360 NILATAVVVN STVLNAKHPS RHVFHIVTDR LNYAPMKMWF LSNPPGKATI EVQNIDEFTW 420 LNETYSPVLK QLGSQSMIDY YFRAQRANSD SNLKYRNPKY LSMLNHLRFY LPEIYPKLDK 480 MVFLDDDVVV KKDLTGLWSI DMKGKVNGAV ETCGESFHRF DRYLNFSNPV IAKNFDPHAC 540 GWAFGMNVFD LAEWRRQDIT EIYHSWQKLN EDRLLWKLGT LPPGLITFWN KTFPLNRSWH 600 VLGLGYNPHV NSRDIERAAV IHYNGNMKPW LEIGLPKFRS YWSKYLYYDQ PFLRECNINP 660 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 7.0e-173 | 255 | 660 | 411 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 40 | 660 | 624 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 203 | 659 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 72 | 658 | 596 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 196 | 658 | 468 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 43 | 660 | 29 | 649 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 49 | 660 | 3 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 35 | 660 | 20 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 43 | 660 | 29 | 648 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 43 | 660 | 28 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000009 | 457 | 630 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00002 | 457 | 630 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00002 | 457 | 630 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |