Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g20550.2 |
Family | GT8 |
Protein Properties | Length: 640 Molecular Weight: 72774.4 Isoelectric Point: 9.6178 |
Chromosome | Chromosome/Scaffold: 3 Start: 19558456 End: 19564513 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 301 | 611 | 0 |
CLPLRLANEYFSLDSVQQQFPNHEKLDDPKLYHYALFSDNILATAVVVNSTVLNAKHPSRHVFHIVTDRLNYAPMKMWFLSNPPGKATIEVQNIDEFTWL NETYSPVLKQLGSQSMIDYYFRAQRANSDSNLKYRNPKYLSMLNHLRFYLPEIYPKLDKMVFLDDDVVVKKDLTGLWSIDMKGKVNGAVETCGESFHRFD RYLNFSNPVIAKNFDPHACGWAFGMNVFDLAEWRRQDITEIYHSWQKLNEDRLLWKLGTLPPGLITFWNKTFPLNRSWHVLGLGYNPHVNSRDIERAAVI HYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 640 Download |
MVCTEARPKA QRNNSAMVRT GRSVLLFLLA LTVLSPLVLY TRRLSVALNP IQRKDLPGEI 60 ANQGLGVKAS SRLNALPLET VSSLKEPVGV VFSEEPRDLS NESIESKDQE STPRKKANRA 120 LSEVTAADGA GSKEDGLIDQ VTRQEGQDGS LASSLETPAK VLVENPQKES TDVKSKNMAL 180 PDTRVRNIKD QLIKAKVYLG LGAIRANSQY LRDLRQRIRE VQKVLGDATK DSDLPKNANE 240 KVKALEQTLI KGKQTQDDCS VVVKKLRAML HSAEEQLLAQ KKQTVFLTQL AAKTLPKGLH 300 CLPLRLANEY FSLDSVQQQF PNHEKLDDPK LYHYALFSDN ILATAVVVNS TVLNAKHPSR 360 HVFHIVTDRL NYAPMKMWFL SNPPGKATIE VQNIDEFTWL NETYSPVLKQ LGSQSMIDYY 420 FRAQRANSDS NLKYRNPKYL SMLNHLRFYL PEIYPKLDKM VFLDDDVVVK KDLTGLWSID 480 MKGKVNGAVE TCGESFHRFD RYLNFSNPVI AKNFDPHACG WAFGMNVFDL AEWRRQDITE 540 IYHSWQKLNE DRLLWKLGTL PPGLITFWNK TFPLNRSWHV LGLGYNPHVN SRDIERAAVI 600 HYNGNMKPWL EIGLPKFRSY WSKYLYYDQP FLRECNINP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 7.0e-173 | 234 | 639 | 411 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 40 | 639 | 623 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 182 | 638 | 462 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 72 | 637 | 579 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 175 | 637 | 468 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 43 | 639 | 29 | 649 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 49 | 639 | 3 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 35 | 639 | 20 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 43 | 639 | 29 | 648 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 43 | 639 | 28 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000006 | 436 | 609 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00002 | 436 | 609 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00002 | 436 | 609 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |