CAZyme Information

Basic Information
SpeciesBrachypodium distachyon
Cazyme IDBradi3g26810.1
FamilyGH18
Protein PropertiesLength: 291 Molecular Weight: 31296.4 Isoelectric Point: 8.8674
ChromosomeChromosome/Scaffold: 3 Start: 27566304 End: 27567562
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18632069.7e-22
  LHHVHGSPDPNGRPAKRLNPNVRVAVSLGGATVSGKPVFFNATSVDSWVSNAVESLTAIVRRYGLDGIDIDYEQFQADPATFAACAGRLVAGLKRAGVIS
  SASIAPYGNAEVQRYYRALWADQHVHGADIDYVNFQFYAYGAST
Full Sequence
Protein Sequence     Length: 291     Download
MGSSKLTTAV ILLLLPALLA PMATAASNSN LFRDYIGAMY NGVRFTDVPV DPRVRVDYIR    60
HRLHHVHGSP DPNGRPAKRL NPNVRVAVSL GGATVSGKPV FFNATSVDSW VSNAVESLTA    120
IVRRYGLDGI DIDYEQFQAD PATFAACAGR LVAGLKRAGV ISSASIAPYG NAEVQRYYRA    180
LWADQHVHGA DIDYVNFQFY AYGASTTAAR YVSLFDEQMA NYPGANILAS FTTAATTTSV    240
PVDAALSACR TLQSQGKLYG VFLWAADHSK KQGFKYETEV QALLANATGY *             300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00636Glyco_183.0e-777200136+
cd06548GH18_chitinase7.0e-87813558+
cd00598GH18_chitinase-like9.0e-1278200127+
pfam00704Glyco_hydro_189.0e-1481202129+
cd06544GH18_narbonin3.0e-7731269257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO15366.10282882279AF330230_1 chitinase [Oryza sativa Japonica Group]
GenBankACF88258.102128723305unknown [Zea mays]
RefSeqNP_001064605.102828827304Os10g0416100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152001.102128723305chitinase 2 [Zea mays]
RefSeqXP_002467243.1012871306hypothetical protein SORBIDRAFT_01g021920 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0312842273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0312842273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A1e-207828572288A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3qok_A0.00036320382230A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
PDB1wno_B0.0017814084144A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation II3.2.1.14-RXNEC-3.2.1.14chitinase
chitin degradation IIRXN-12623EC-3.2.1.14chitinase
chitin degradation IIRXN-12624EC-3.2.1.14chitinase
chitin degradation III (carnivorous plants)3.2.1.14-RXNEC-3.2.1.14chitinase
Transmembrane Domains
StartEnd
1032
Signal Peptide
Cleavage Site
25
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HX192388215782910
HX162351215782910
HX142588212812910
CT853760278282850
HO304470214782910
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny