Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g28020.1 |
Family | GT47 |
Protein Properties | Length: 486 Molecular Weight: 54256.3 Isoelectric Point: 7.9137 |
Chromosome | Chromosome/Scaffold: 3 Start: 29365002 End: 29366653 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 60 | 414 | 0 |
CRGRYVYMHELPPRFNAEILRGCGSTDGRWPDMCEQLSNAGLGQPLGDEIGAGQTKGDYVGLTAAGGWYATHQFALDAIFHGRMRRHRCLTNDSSKAAAV FVPFYAGFDFVRHHWGYDDATRDAASRDLARWLVRRPEWRRAGGRDHFLVAGRTAWDFRRDTNLNSNWGTNLLLLEATKNMTVLVVESSAPGHGNDAAVP YPTYFHPRAAADVLDWQNRIRNADRPWLMSFVGAPRPGDPRSIRSQIIAQCGAASSACQQLGCAFGASQCHTPAAIMRLFESSVFCLQPPGDSYTRRSAF DAMVAGCVPVFFHPASAYLQYTWHLPRDHARYSVYIPEDDVRAGTVSIEETLKRI |
Full Sequence |
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Protein Sequence Length: 486 Download |
MEKSGAVPRW RFLLLVAAAF WVCILYFRMS LVLTGVAVEH TVSYAPGYDN RRGGDDADPC 60 RGRYVYMHEL PPRFNAEILR GCGSTDGRWP DMCEQLSNAG LGQPLGDEIG AGQTKGDYVG 120 LTAAGGWYAT HQFALDAIFH GRMRRHRCLT NDSSKAAAVF VPFYAGFDFV RHHWGYDDAT 180 RDAASRDLAR WLVRRPEWRR AGGRDHFLVA GRTAWDFRRD TNLNSNWGTN LLLLEATKNM 240 TVLVVESSAP GHGNDAAVPY PTYFHPRAAA DVLDWQNRIR NADRPWLMSF VGAPRPGDPR 300 SIRSQIIAQC GAASSACQQL GCAFGASQCH TPAAIMRLFE SSVFCLQPPG DSYTRRSAFD 360 AMVAGCVPVF FHPASAYLQY TWHLPRDHAR YSVYIPEDDV RAGTVSIEET LKRIPPAAVR 420 RMQEEVVRLV PRLVYADPRY TMETVKDAFD VAVDAVVDKV AETRTGESEG GEVRWSSWLH 480 KIWSN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-63 | 59 | 414 | 366 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO17347.1 | 0 | 1 | 466 | 178 | 625 | Hypothetical protein [Oryza sativa Japonica Group] |
GenBank | EEE58313.1 | 0 | 1 | 466 | 212 | 659 | hypothetical protein OsJ_09380 [Oryza sativa Japonica Group] |
RefSeq | NP_001048943.1 | 0 | 1 | 466 | 34 | 481 | Os03g0144300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002464522.1 | 0 | 1 | 472 | 2 | 456 | hypothetical protein SORBIDRAFT_01g020060 [Sorghum bicolor] |
RefSeq | XP_002468519.1 | 0 | 1 | 473 | 1 | 461 | hypothetical protein SORBIDRAFT_01g047290 [Sorghum bicolor] |