Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g28040.1 |
Family | GT47 |
Protein Properties | Length: 564 Molecular Weight: 61831.6 Isoelectric Point: 6.74 |
Chromosome | Chromosome/Scaffold: 3 Start: 29378874 End: 29380800 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 103 | 468 | 0 |
CAGRYVYVQELPPHFNSDMARDCEALSEWTEAGKCKHTANGGFGPPQPSSGVEETVLFQGQETGGWYDTEEHALDIIFHDRVKRYECLTADSSLASAVFV PFYAGLDVARHLPGKGRYHVATRDEMALAMVEFVTARPEWRALGGRDHFFVAGRGTWDFRRSQDDGGGWGNKLFLLPAVRNMTALVVEASPWHLNDAAVP YPTGFHPTTDEHVFLWQHRLRELKRQSLFAFFVSGAPQGTEEDPKSVSSHLVKQCAASSACSLVRDEDSSPAAAGIMKLYQSSTFCLHPRGGAGDAYTRR SIFDAILAGCIPVFFHPGTAYVQYTWHLPRDHARYSVYIPEEDVLRAGAGNNNASSSSSVEETLRK |
Full Sequence |
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Protein Sequence Length: 564 Download |
MKRHHAADLP ASSGGEMHAG TGKAACKLDK GRSTSSCPRL CCLLVLCTTV SMLVIHCYDY 60 GHADTGVEHG RSSSSSPLHG IRKMSSISAK PANNGDRIRG DLCAGRYVYV QELPPHFNSD 120 MARDCEALSE WTEAGKCKHT ANGGFGPPQP SSGVEETVLF QGQETGGWYD TEEHALDIIF 180 HDRVKRYECL TADSSLASAV FVPFYAGLDV ARHLPGKGRY HVATRDEMAL AMVEFVTARP 240 EWRALGGRDH FFVAGRGTWD FRRSQDDGGG WGNKLFLLPA VRNMTALVVE ASPWHLNDAA 300 VPYPTGFHPT TDEHVFLWQH RLRELKRQSL FAFFVSGAPQ GTEEDPKSVS SHLVKQCAAS 360 SACSLVRDED SSPAAAGIMK LYQSSTFCLH PRGGAGDAYT RRSIFDAILA GCIPVFFHPG 420 TAYVQYTWHL PRDHARYSVY IPEEDVLRAG AGNNNASSSS SVEETLRKIP PDAVERMRAA 480 VVELIPTVIY ADTSSRLEAS SVPDAFDVAV EAVIKKVTKL RKDLVEGRAE DEKLGKFGWK 540 YPLLGEGHKV EDPHEWDSLF AYN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-52 | 102 | 469 | 381 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC67107.1 | 0 | 99 | 562 | 179 | 616 | hypothetical protein OsI_33904 [Oryza sativa Indica Group] |
GenBank | EEE51089.1 | 0 | 1 | 562 | 1 | 585 | hypothetical protein OsJ_31792 [Oryza sativa Japonica Group] |
RefSeq | NP_001064770.1 | 0 | 1 | 562 | 1 | 590 | Os10g0459600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002464523.1 | 0 | 1 | 560 | 1 | 612 | hypothetical protein SORBIDRAFT_01g020070 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG636298 | 267 | 183 | 446 | 0 |
EL456596 | 288 | 151 | 433 | 0 |
CX076275 | 264 | 186 | 446 | 0 |
EL472986 | 264 | 175 | 433 | 0 |
CF668912 | 302 | 227 | 523 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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