| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g28210.1 |
| Family | GH14 |
| Protein Properties | Length: 535 Molecular Weight: 58473 Isoelectric Point: 7.2582 |
| Chromosome | Chromosome/Scaffold: 3 Start: 29556156 End: 29558022 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 70 | 493 | 0 |
| FVMLPLDTVKQCGSGLKRRKAMAASLAALKSAGVEGVMVDVWWGTVESEGPGRYNFAGYMELMEMARDTGLKVQAVMSFHKCGGNVGDSVTIPLPRWVTE EMDKDQDLAYTDQWERRNYEYVSLGCDAVPVLNGRAPVQCYTDFMRAFRDHFTRFLGNTIVEIQVGLGPAGELRFPSYPESNGTWRFPGIGAFQCYNRYM LSSLKSAAEAAGKPEWGISGPTDAGEYNSWPEDTLFFRQDGGGWGCEYGEFFMSWYSQMLLDHGDRVLSGAASVFSASASPDVDDIRLSAKVSGIHWHYG TRSHAPELTAGYYNTGDRDGYRPVARMLARHGAVLNFTCVEMRDREQPREARCMPEALVRQVAAAARDAGVGLAGENALPRYDGAAHDQVVATAAERAEE DRMVAFTYLRMGPDLFQPDNWRRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 535 Download |
| MAFNLAQSAV AASSFAPSTA RRVAAPRRKA ASQVPPIGLR LQRRLAACEP SRMSSTACRA 60 SARSSGVPVF VMLPLDTVKQ CGSGLKRRKA MAASLAALKS AGVEGVMVDV WWGTVESEGP 120 GRYNFAGYME LMEMARDTGL KVQAVMSFHK CGGNVGDSVT IPLPRWVTEE MDKDQDLAYT 180 DQWERRNYEY VSLGCDAVPV LNGRAPVQCY TDFMRAFRDH FTRFLGNTIV EIQVGLGPAG 240 ELRFPSYPES NGTWRFPGIG AFQCYNRYML SSLKSAAEAA GKPEWGISGP TDAGEYNSWP 300 EDTLFFRQDG GGWGCEYGEF FMSWYSQMLL DHGDRVLSGA ASVFSASASP DVDDIRLSAK 360 VSGIHWHYGT RSHAPELTAG YYNTGDRDGY RPVARMLARH GAVLNFTCVE MRDREQPREA 420 RCMPEALVRQ VAAAARDAGV GLAGENALPR YDGAAHDQVV ATAAERAEED RMVAFTYLRM 480 GPDLFQPDNW RRFAAFVNRM SKSGSCREAA EREAHGVAHA TGALVHEAAV ALRD* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02161 | PLN02161 | 3.0e-118 | 67 | 501 | 438 | + beta-amylase | ||
| PLN02905 | PLN02905 | 7.0e-122 | 67 | 500 | 441 | + beta-amylase | ||
| PLN02801 | PLN02801 | 3.0e-163 | 67 | 515 | 456 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 66 | 532 | 474 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 66 | 516 | 451 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29617.1 | 0 | 25 | 534 | 67 | 572 | beta-amylase [Zea mays] |
| GenBank | EAY88485.1 | 0 | 30 | 534 | 56 | 556 | hypothetical protein OsI_09956 [Oryza sativa Indica Group] |
| RefSeq | NP_001048926.1 | 0 | 30 | 534 | 57 | 557 | Os03g0141200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147532.1 | 0 | 1 | 533 | 1 | 543 | beta-amylase [Zea mays] |
| RefSeq | XP_002467119.1 | 0 | 1 | 533 | 1 | 546 | hypothetical protein SORBIDRAFT_01g019850 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 67 | 518 | 12 | 459 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1q6c_A | 0 | 67 | 518 | 12 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 67 | 518 | 12 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 67 | 518 | 12 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 67 | 518 | 12 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 414 | 127 | 533 | 0 |
| HO826564 | 408 | 124 | 528 | 0 |
| BU103692 | 440 | 66 | 505 | 0 |
| HO624546 | 435 | 102 | 529 | 0 |
| HO593646 | 435 | 102 | 529 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
