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Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g28580.1 |
Family | GH116 |
Protein Properties | Length: 963 Molecular Weight: 107994 Isoelectric Point: 6.845 |
Chromosome | Chromosome/Scaffold: 3 Start: 29961736 End: 29973090 |
Description | Beta-glucosidase, GBA2 type family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH116 | 545 | 907 | 0 |
GKFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELSIQRDFADAVLYEDRRRVKFLADGTSGIRKVKGAVPHDLGTHDPWHEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMTFGRDVWPAVCAAMDYMDQFDRDGDGLIENDGFPDQTYDAWTVHGISAYCGCLWLAALQAAATMAHRLGDRPYAEKYKLKFIKA KAVYEAKLWNGSYFNYDSGTSSNSRSIQADQLAGQWYAASSGLPPIFDEHKIRSALQKIFEFNVMKVKGGRMGAVNGMTPKGKVDETCMQSREIWTGVTY GVAANMLLHGMEHQGFITAEGIFLAGWSEEGYGYWFQTPEGWTTDGHYRSLIYMRPLAIWAMQ |
Full Sequence |
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Protein Sequence Length: 963 Download |
MVSGHLFHCR KNSWPPEEYV GRSALQLLDL DGAAPPEQAW RRRLNSHANI LKEFSVTFME 60 AMKMMSLGVR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FKNWHIIPGL CENSPVMENQ FSIFVSRDGG NKKCSSVLAP GHHDGLKKYS DSGISSWDWN 180 LSGQHSTYHA LFPRAWTVYD GEPDPDLKIS CRQISPFIPH DYKESSLPTS VFVYTLVNTG 240 RDRAKVSLLM TWANSIGGFS HHSGGHFNEP FIGEDGVSGV LLHHKTAKDN PPVTFAIAAC 300 ETQNVNVTVL PVFGLSGENH VSAKDMWDIM KKDGHFNLEN FNAGCSMPSS PGETLCAAVT 360 ASTWVEPHGR CTVAFALSWS SPKVKFQKGC TYNRRYTEFY GTSERSSINL VHDALTKYRL 420 WEEEIEKWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW TDGQPPAIDE KTNPASNQQK 480 HSKKPIKDTK SESVKDNLPR PTAEQVFNGD DLTNGGPQMP EQTNGLRVQE PVPCIHSKDG 540 PENVGKFLYL EGVEYIMWNT YDVHFYASFA LLDLFPKIEL SIQRDFADAV LYEDRRRVKF 600 LADGTSGIRK VKGAVPHDLG THDPWHEMNA YNIHDTSKWK DLNPKFVLQV YRDFAATGDM 660 TFGRDVWPAV CAAMDYMDQF DRDGDGLIEN DGFPDQTYDA WTVHGISAYC GCLWLAALQA 720 AATMAHRLGD RPYAEKYKLK FIKAKAVYEA KLWNGSYFNY DSGTSSNSRS IQADQLAGQW 780 YAASSGLPPI FDEHKIRSAL QKIFEFNVMK VKGGRMGAVN GMTPKGKVDE TCMQSREIWT 840 GVTYGVAANM LLHGMEHQGF ITAEGIFLAG WSEEGYGYWF QTPEGWTTDG HYRSLIYMRP 900 LAIWAMQWAL SPPKAILEAP KVNLMDRIHV SPQAARAISE ISIRKIAPDN RCISSSTFQC 960 EC* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 7.0e-5 | 613 | 702 | 99 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
COG4354 | COG4354 | 4.0e-26 | 102 | 462 | 376 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam12215 | GBA2_N | 9.0e-60 | 102 | 421 | 334 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
COG4354 | COG4354 | 1.0e-68 | 544 | 910 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam04685 | DUF608 | 3.0e-164 | 545 | 908 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0004348 | glucosylceramidase activity |
GO:0006665 | sphingolipid metabolic process |
GO:0016021 | integral to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL31035.1 | 0 | 1 | 962 | 1 | 967 | AC078948_19 unknown protein [Oryza sativa Japonica Group] |
GenBank | EEC67156.1 | 0 | 1 | 962 | 1 | 974 | hypothetical protein OsI_34005 [Oryza sativa Indica Group] |
GenBank | EEE51125.1 | 0 | 1 | 962 | 1 | 935 | hypothetical protein OsJ_31868 [Oryza sativa Japonica Group] |
RefSeq | NP_001064833.1 | 0 | 1 | 962 | 1 | 974 | Os10g0473400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002285674.1 | 0 | 1 | 962 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT045992 | 339 | 611 | 949 | 0 |
GO856558 | 338 | 619 | 956 | 0 |
GO868913 | 331 | 528 | 858 | 0 |
GT045437 | 318 | 117 | 434 | 0 |
GT045437 | 29 | 429 | 457 | 0.00008 |
Sequence Alignments (This image is cropped. Click for full image.) |
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