| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g28657.1 |
| Family | AA3 |
| Protein Properties | Length: 758 Molecular Weight: 81637.1 Isoelectric Point: 7.5339 |
| Chromosome | Chromosome/Scaffold: 3 Start: 30067008 End: 30071662 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 236 | 752 | 1.12104e-44 |
| SNGPHHTVQCDAVIVGSGCGGGVAAAVLAAAGHKVVVLEKGDYFAAQDYSSVEGPSMERLYEQGGIFCTSNVTTVLYSGTTVGGGSAVNWSASIRTPREI LQEWSRGHGLPVFASAGYAQAMDAVSARLAVSDACLEEGFQNKVVRRGCEALGLPVDAVPRNSSADHYCGSCNLGCPTGDKRGTDTTWLVDAVEHGAVII TGCKADRFILESSYTGKGRRGKKCVGLVATCGITQKKLRIEAKVSISACGALMTPPLLRSSGLKNRHIGRNLHLHPVSMAWGYFPEEPEPQEQDAEEIIS GKCYEGGIITSMHRVTERTIIETPALGPGAFASLVPWESGRDMKERMRRYARTAHAFALVRDRGAGSVDGEGRVHFVPSRDDNEELRNGLRRALRIMVAA GAAEVGTHRSDGLRLRCKGVRDEDLEAFLDDVAVARGPMQAGTDTWALLCSAHQMGSCRMGSSPREGAVDGSGESWEAEGLYVCDGSLLPTAVGVNPMIT IQSLAYCLSKNIAESLA | |||
| Full Sequence |
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| Protein Sequence Length: 758 Download |
| MAASEEESKA APGHPLLRVL RRDEYTHGLR PAQMEALRAM CGALIPSLPL PPEEGGNKDL 60 ERFYLASGAD SAVPDEVAEL AFTRCVWEAG VLVSVALWLL TTRLGTLALC GWLCVVDSSV 120 RRFADMPVER REAALQRWTR ARWLIPVKIA FAIVKSLLFN VFYTKVNENS ENPCWKAIGY 180 SVPDVEEQRR RRKNGTEATA RRRPLDKGVV ETRELDDAAL LRSLAAKGLT VKPAASNGPH 240 HTVQCDAVIV GSGCGGGVAA AVLAAAGHKV VVLEKGDYFA AQDYSSVEGP SMERLYEQGG 300 IFCTSNVTTV LYSGTTVGGG SAVNWSASIR TPREILQEWS RGHGLPVFAS AGYAQAMDAV 360 SARLAVSDAC LEEGFQNKVV RRGCEALGLP VDAVPRNSSA DHYCGSCNLG CPTGDKRGTD 420 TTWLVDAVEH GAVIITGCKA DRFILESSYT GKGRRGKKCV GLVATCGITQ KKLRIEAKVS 480 ISACGALMTP PLLRSSGLKN RHIGRNLHLH PVSMAWGYFP EEPEPQEQDA EEIISGKCYE 540 GGIITSMHRV TERTIIETPA LGPGAFASLV PWESGRDMKE RMRRYARTAH AFALVRDRGA 600 GSVDGEGRVH FVPSRDDNEE LRNGLRRALR IMVAAGAAEV GTHRSDGLRL RCKGVRDEDL 660 EAFLDDVAVA RGPMQAGTDT WALLCSAHQM GSCRMGSSPR EGAVDGSGES WEAEGLYVCD 720 GSLLPTAVGV NPMITIQSLA YCLSKNIAES LAQSMKR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.002 | 646 | 740 | 99 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 9.0e-19 | 608 | 743 | 136 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 4.0e-21 | 314 | 741 | 481 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-85 | 292 | 512 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36691.1 | 0 | 9 | 753 | 31 | 777 | unknown [Zea mays] |
| DDBJ | BAH94933.1 | 0 | 13 | 753 | 11 | 760 | Os10g0474966 [Oryza sativa Japonica Group] |
| RefSeq | NP_001142399.1 | 0 | 83 | 753 | 3 | 669 | hypothetical protein LOC100274574 [Zea mays] |
| RefSeq | XP_002464495.1 | 0 | 3 | 757 | 2 | 772 | hypothetical protein SORBIDRAFT_01g019470 [Sorghum bicolor] |
| RefSeq | XP_002464496.1 | 0 | 34 | 757 | 1 | 732 | hypothetical protein SORBIDRAFT_01g019480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.0001 | 680 | 740 | 439 | 494 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
| PDB | 1coy_A | 0.0001 | 680 | 740 | 439 | 494 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1b8s_A | 0.0001 | 688 | 755 | 442 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 2gew_A | 0.0001 | 688 | 755 | 442 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4w_A | 0.0001 | 688 | 755 | 442 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 760 | 14 | 751 | 0 |
| EG400359 | 287 | 460 | 743 | 0 |
| CK208913 | 328 | 309 | 633 | 0 |
| CT860754 | 308 | 434 | 738 | 0 |
| DV856521 | 292 | 467 | 758 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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