Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g31630.1 |
Family | AA3 |
Protein Properties | Length: 584 Molecular Weight: 63048.6 Isoelectric Point: 8.2911 |
Chromosome | Chromosome/Scaffold: 3 Start: 33895891 End: 33897889 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 42 | 582 | 0 |
ASDAPLVSHFNYIIVGGGTSGCPLAATLSEHSRVLLLERGGLPHANMSSQEHFTDALADTSPASPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRASNE YVRTAGWDPRLVNSSYRWVERALVFRPGVPPWQAALRDALLEAGVTPDNGFTFDHVTGTKIGGTIFDGNGQRHTAADFLRHARPRGLTVVLYATVSRILF RSQEGVPYPVAYGVVFGDPLGVQHRVYLRDGAKNEVILAAGTLGSPQLLMLSGVGPQAHLEAHGIQALVDQPMVGQGVADNPMNSVFIPSPVPVGLSLVQ VVGITKSGSFIEGVSGSEFGIPVSDSARRLAASFGLFSPQTGQLGTLPPKQRTPEALQRAADAMRRLDRRAFRGGFILEKILGPVSTGHVELRTTDPRAN PAVLFNYFQEAEDLERCVRGIQTIERVIASRAFSNFTYSNASVESIFSDSANFPVNLLPRHANDSRSPEQYCRETVMTIWHYHGGCHVGAVVDDDYRVFG VRGLRVIDSSTFRYSPGTNPQATVMMLGRYMGVKIQAERWR |
Full Sequence |
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Protein Sequence Length: 584 Download |
MALCRAISAA LVLAAAVLLG SLCPVALSED ERLENLRFVQ HASDAPLVSH FNYIIVGGGT 60 SGCPLAATLS EHSRVLLLER GGLPHANMSS QEHFTDALAD TSPASPAQRF VSEDGVVNAR 120 ARVLGGGSCL NAGFYTRASN EYVRTAGWDP RLVNSSYRWV ERALVFRPGV PPWQAALRDA 180 LLEAGVTPDN GFTFDHVTGT KIGGTIFDGN GQRHTAADFL RHARPRGLTV VLYATVSRIL 240 FRSQEGVPYP VAYGVVFGDP LGVQHRVYLR DGAKNEVILA AGTLGSPQLL MLSGVGPQAH 300 LEAHGIQALV DQPMVGQGVA DNPMNSVFIP SPVPVGLSLV QVVGITKSGS FIEGVSGSEF 360 GIPVSDSARR LAASFGLFSP QTGQLGTLPP KQRTPEALQR AADAMRRLDR RAFRGGFILE 420 KILGPVSTGH VELRTTDPRA NPAVLFNYFQ EAEDLERCVR GIQTIERVIA SRAFSNFTYS 480 NASVESIFSD SANFPVNLLP RHANDSRSPE QYCRETVMTI WHYHGGCHVG AVVDDDYRVF 540 GVRGLRVIDS STFRYSPGTN PQATVMMLGR YMGVKIQAER WRK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 3.0e-16 | 425 | 569 | 152 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 2.0e-27 | 54 | 569 | 556 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PRK02106 | PRK02106 | 5.0e-30 | 50 | 321 | 324 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 5.0e-42 | 50 | 570 | 571 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 35 | 580 | 559 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF65820.1 | 0 | 35 | 583 | 40 | 589 | AF251031_1 putative mandelonitrile lyase [Oryza sativa] |
GenBank | ACN28873.1 | 0 | 88 | 583 | 1 | 496 | unknown [Zea mays] |
GenBank | EAY79265.1 | 0 | 35 | 583 | 40 | 588 | hypothetical protein OsI_34381 [Oryza sativa Indica Group] |
RefSeq | NP_001065107.1 | 0 | 29 | 583 | 32 | 586 | Os10g0524500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002467623.1 | 0 | 1 | 583 | 1 | 582 | hypothetical protein SORBIDRAFT_01g031110 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 25 | 580 | 1 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 25 | 580 | 1 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 25 | 580 | 1 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 25 | 580 | 1 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 25 | 580 | 1 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |