Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi3g32980.1 |
Family | GT47 |
Protein Properties | Length: 458 Molecular Weight: 51241.5 Isoelectric Point: 8.7022 |
Chromosome | Chromosome/Scaffold: 3 Start: 35356374 End: 35357932 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 30 | 382 | 0 |
CAGRRIHIRALPPRFNTHLLRHCDAAFPLADPSASAPPSCASLANHGLGPRTHPRSRSWYRTDARLLEPFFHRRILERRCLAADPALADAVFVPYYASLD ALPYLLDPALLDSSASHGASLAEFLAHDRPQILSRRHGHDHFLVLAGSAWDHSQPPELEKGQQPRMWGSTSLIRRPEFENFTVLALESRTWPWQEHAIPH PTSFHPSSLRRLQAWLDRARRSRRPVLMLFAGGVSRPSRPNIRGSILAECANRTDACVVVDCSAGKCAHDPVRYTRPMLRSRFCLEPPGDTPTRRSTFDA ILAGCVPVFFEDAAARRQYGWHLPPARYDEFSVYIQKETVVLGGVRIAETLAA |
Full Sequence |
---|
Protein Sequence Length: 458 Download |
MPNPVLLLLL PVLLHAVAAV SSEDSAEDPC AGRRIHIRAL PPRFNTHLLR HCDAAFPLAD 60 PSASAPPSCA SLANHGLGPR THPRSRSWYR TDARLLEPFF HRRILERRCL AADPALADAV 120 FVPYYASLDA LPYLLDPALL DSSASHGASL AEFLAHDRPQ ILSRRHGHDH FLVLAGSAWD 180 HSQPPELEKG QQPRMWGSTS LIRRPEFENF TVLALESRTW PWQEHAIPHP TSFHPSSLRR 240 LQAWLDRARR SRRPVLMLFA GGVSRPSRPN IRGSILAECA NRTDACVVVD CSAGKCAHDP 300 VRYTRPMLRS RFCLEPPGDT PTRRSTFDAI LAGCVPVFFE DAAARRQYGW HLPPARYDEF 360 SVYIQKETVV LGGVRIAETL AAVPEAEVRR MRERALEMAP RVMYRRHGST AELRRAGMDA 420 VDLAVEGTLR RIRGRTRALE DGQPERIYAL EDDSIEP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-47 | 29 | 383 | 367 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG13471.2 | 0 | 27 | 456 | 29 | 462 | AC026758_8 hypothetical protein [Oryza sativa Japonica Group] |
GenBank | ACF22751.1 | 0 | 28 | 456 | 37 | 460 | exostosin family protein [Brachypodium distachyon] |
GenBank | ACN36955.1 | 0 | 1 | 456 | 1 | 454 | unknown [Zea mays] |
RefSeq | NP_001065337.1 | 0 | 27 | 456 | 168 | 601 | Os10g0553600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002467522.1 | 0 | 1 | 456 | 1 | 449 | hypothetical protein SORBIDRAFT_01g029520 [Sorghum bicolor] |