| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g33730.1 |
| Family | GH14 |
| Protein Properties | Length: 549 Molecular Weight: 59162.6 Isoelectric Point: 5.9258 |
| Chromosome | Chromosome/Scaffold: 3 Start: 36109354 End: 36111917 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 83 | 498 | 0 |
| YVMLPLDTVGPGGQLLRARALAASLMALRSAGVEGVMVDVWWGVVEREGPGRYDWEGYAELVRMVERAGLRLQMVMSFHQCGGNVGDSCNIPLPSWVLEE VSANPDIVYTDRSGRRNPEYISLGCDTLPVLKGRTPVQVYSDFMRSFRDRFSGYLGTVIAEIQVGLGPCGELRYPSYPEANGTWSFPGIGEFQCYDKYMR ASLQAAAAAAGHENWGTNGPHDAGEYKQFPEETGFFRWDGTWSTEYGSFFLEWYSGMLLEHGDRVLAAAEAVFGGTGAMLSAKVAGIHWHYRTRSHAAEL TAGYYNTRNHDGYAPIAGMLAKRGVVLNFTCMEMKDEQQPGHAGCSPEQLVRQVRAAARAANVELAGENALERYDESAFAQVAATAAAGDAGAGLSAFTY LRMNRNLFDGDNWRRF | |||
| Full Sequence |
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| Protein Sequence Length: 549 Download |
| MALTLRSSTS FLSPLEPSSK LHKAEDAPPS CVAVPAAPSR LRVLRAAAQA PLSPMEAPAP 60 ELLHGQAQQA HSGGQKRGGV PVYVMLPLDT VGPGGQLLRA RALAASLMAL RSAGVEGVMV 120 DVWWGVVERE GPGRYDWEGY AELVRMVERA GLRLQMVMSF HQCGGNVGDS CNIPLPSWVL 180 EEVSANPDIV YTDRSGRRNP EYISLGCDTL PVLKGRTPVQ VYSDFMRSFR DRFSGYLGTV 240 IAEIQVGLGP CGELRYPSYP EANGTWSFPG IGEFQCYDKY MRASLQAAAA AAGHENWGTN 300 GPHDAGEYKQ FPEETGFFRW DGTWSTEYGS FFLEWYSGML LEHGDRVLAA AEAVFGGTGA 360 MLSAKVAGIH WHYRTRSHAA ELTAGYYNTR NHDGYAPIAG MLAKRGVVLN FTCMEMKDEQ 420 QPGHAGCSPE QLVRQVRAAA RAANVELAGE NALERYDESA FAQVAATAAA GDAGAGLSAF 480 TYLRMNRNLF DGDNWRRFVA FVKTMADGGG ARTGLPSCDT GHSDLYVGFL EAANERRAPE 540 AEAAAAAL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-126 | 80 | 505 | 432 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 4.0e-140 | 83 | 501 | 430 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 2.0e-164 | 80 | 505 | 433 | + beta-amylase | ||
| PLN02803 | PLN02803 | 0 | 1 | 530 | 538 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 76 | 508 | 438 | + beta-amylase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF27255.2 | 0 | 1 | 531 | 1 | 506 | Os10g0565200 [Oryza sativa Japonica Group] |
| EMBL | CAN62440.1 | 0 | 1 | 535 | 1 | 533 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001065418.1 | 0 | 1 | 531 | 1 | 528 | Os10g0565200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002282871.1 | 0 | 1 | 535 | 1 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464915.1 | 0 | 1 | 540 | 1 | 547 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 80 | 505 | 12 | 441 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 1q6c_A | 0 | 80 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 80 | 505 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1v3i_A | 0 | 80 | 505 | 12 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1v3h_A | 0 | 80 | 505 | 12 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 537 | 1 | 530 | 0 |
| HO794833 | 413 | 118 | 530 | 0 |
| HO825836 | 377 | 154 | 530 | 0 |
| HO781538 | 348 | 80 | 427 | 0 |
| DT944111 | 286 | 123 | 408 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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