Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g37030.1 |
Family | GT47 |
Protein Properties | Length: 492 Molecular Weight: 55215 Isoelectric Point: 9.6371 |
Chromosome | Chromosome/Scaffold: 3 Start: 39358492 End: 39360287 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 106 | 429 | 0 |
AQLRVYMYDLPPEFHFGMLGWDAKKAAAAGAWPDVRDTGGVPHYPGGLNLQHSVAYWLTLDILSSTAPGFDGRPCVAVRVTNASQADVFFVPFFASLSYN RHSKLQGKEKMSRNRLLQAELVKYLARQEEWRRWGGKDHLVVPHHPNSMMQARKKLSAAMYVLSDFGRYPPDVANLKKDVVAPYKHVVRSLRDDESPTFD QRPVLAYFQGAIHRKDGGKVRQKLYQLLKDEKDVHFTYGSVRQNGIRRATKGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVMISDDIELPFEDVLDYS EFCVFVRASDAVRKGFLLRLLRGI |
Full Sequence |
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Protein Sequence Length: 492 Download |
MQPSPPPEHR RVLRFVTFFA LSLLAFSCWA LVSSRINRAI LIAADADETP LLAGDHGTPL 60 IPAAVPASNN LRISDPAVRE TPPLARGRGE GRGEGSSSSS CDADNAQLRV YMYDLPPEFH 120 FGMLGWDAKK AAAAGAWPDV RDTGGVPHYP GGLNLQHSVA YWLTLDILSS TAPGFDGRPC 180 VAVRVTNASQ ADVFFVPFFA SLSYNRHSKL QGKEKMSRNR LLQAELVKYL ARQEEWRRWG 240 GKDHLVVPHH PNSMMQARKK LSAAMYVLSD FGRYPPDVAN LKKDVVAPYK HVVRSLRDDE 300 SPTFDQRPVL AYFQGAIHRK DGGKVRQKLY QLLKDEKDVH FTYGSVRQNG IRRATKGMAS 360 SKFCLNIAGD TPSSNRLFDA IVSHCVPVMI SDDIELPFED VLDYSEFCVF VRASDAVRKG 420 FLLRLLRGIT RDEWNTMWER LKEVAHHFEY QYPSKPDDAV QMIWGAVARK MHSLKLQLHK 480 SGRFQRTHSE S* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam03016 | Exostosin | 3.0e-58 | 108 | 424 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC83632.1 | 0 | 8 | 491 | 70 | 566 | hypothetical protein OsI_29363 [Oryza sativa Indica Group] |
RefSeq | NP_001061895.1 | 0 | 8 | 491 | 70 | 566 | Os08g0438600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002284930.1 | 0 | 89 | 488 | 59 | 449 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002284932.1 | 0 | 89 | 488 | 20 | 410 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002444408.1 | 0 | 1 | 491 | 11 | 539 | hypothetical protein SORBIDRAFT_07g021480 [Sorghum bicolor] |