Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi3g37340.1 |
Family | CE8 |
Protein Properties | Length: 544 Molecular Weight: 57524.8 Isoelectric Point: 6.8983 |
Chromosome | Chromosome/Scaffold: 3 Start: 39737232 End: 39740844 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 221 | 526 | 0 |
AVVAQDGSGNHTTVQAALDAAPSESGARYVIYVKRGVYKETVEVKKKKWNVMLVGDGMGATVISGRRNYVDGYTTYHTATVAVTGKGFMARDLTVENTAG PAKHQAVALRCDSDLSVFYRCALEGHQDTLYAHSLRQFYRDCRVSGTVDFVFGNAAAVFQNCLLLPRAPLPEQKNSVTAQGRINGTMNTGFAFQFCNVSA HDDLLAAAANRSGSNNKQAATQTYLGRPWKEFSRVVFMQSYIGAVVRPEGWLAWDGDYALDTLYYGEYMNTGPGAGVAGRVGWPGYHVMTSPAEASNFTV AQFIEG |
Full Sequence |
---|
Protein Sequence Length: 544 Download |
MAPTSPSSTA RLLLTIALGL LLLTNAHPLT PSPSKNPPTK TKSTNGISPE LVSTLRETLE 60 AIKGVVSIIS SFPIGGILGG GDLRLTSAVA DCLDLLDLSS DELSWSMSSS SSSSSSSSSR 120 PGTGDAHADV RSWLSGALGN QDTCKEGLDE TGSILGSLVS TGLEAVTSLL ADGLGQVAAV 180 GHDDDRRGLV ETGRALPHWV GRRERRLLQM AVGPGGLAVD AVVAQDGSGN HTTVQAALDA 240 APSESGARYV IYVKRGVYKE TVEVKKKKWN VMLVGDGMGA TVISGRRNYV DGYTTYHTAT 300 VAVTGKGFMA RDLTVENTAG PAKHQAVALR CDSDLSVFYR CALEGHQDTL YAHSLRQFYR 360 DCRVSGTVDF VFGNAAAVFQ NCLLLPRAPL PEQKNSVTAQ GRINGTMNTG FAFQFCNVSA 420 HDDLLAAAAN RSGSNNKQAA TQTYLGRPWK EFSRVVFMQS YIGAVVRPEG WLAWDGDYAL 480 DTLYYGEYMN TGPGAGVAGR VGWPGYHVMT SPAEASNFTV AQFIEGNMWL PPTGVRFTAG 540 LTS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 4.0e-145 | 129 | 541 | 430 | + pectinesterase | ||
PLN02506 | PLN02506 | 1.0e-150 | 120 | 543 | 431 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-154 | 122 | 541 | 422 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-177 | 220 | 527 | 308 | + Pectinesterase. | ||
PLN02201 | PLN02201 | 0 | 50 | 543 | 502 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07184.1 | 0 | 1 | 543 | 1 | 560 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
RefSeq | NP_001061940.1 | 0 | 1 | 543 | 1 | 557 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147569.1 | 0 | 47 | 543 | 53 | 559 | pectinesterase PPE8B [Zea mays] |
Swiss-Prot | Q43062 | 0 | 50 | 539 | 55 | 518 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002444448.1 | 0 | 23 | 543 | 38 | 584 | hypothetical protein SORBIDRAFT_07g022090 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 217 | 541 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 212 | 541 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 4e-19 | 220 | 387 | 32 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-18 | 220 | 387 | 5 | 193 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-18 | 220 | 387 | 5 | 193 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |