| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g40907.1 |
| Family | CBM43 |
| Protein Properties | Length: 591 Molecular Weight: 62210.8 Isoelectric Point: 8.9872 |
| Chromosome | Chromosome/Scaffold: 3 Start: 42991035 End: 42993176 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 397 | 480 | 1.8e-32 |
| WCVLLPGKDEKAVAAALNYACGQGSGTCAAIQPGAVCFEPNTLDAHASYAFNSYWQQFRKSGASCSFNGLATTTTTDPSHGSCK | |||
| CBM43 | 501 | 584 | 1.4e-33 |
| WCVLAPGKDEKAVEAALNYACGQGQGTCAAIQPGGACFEPNTLDAHASYAFNSYWQQFRKTGGSCSFNGLAVTTTADPSHGSCK | |||
| GH17 | 44 | 364 | 0 |
| LGVNYGTLGDNLPTPTRSVRLLRDAGAGAVKIYDANPEILSAFAGTGIPVSAMVPNEIIPSIAASRAAAHKWVVNNLPKPSSHGPKIVYLLVGNELLSNQ AIKDSTWGAIVPAMRNLRHALRKHGMGRVKLGTPLAMDALSASYPPSSSLFRDDIELKVMRPLLRFLNLTKSYYFVDAYPYFAWAGNQDTISLDYALFQG KSGAFHVDPQTGLKYTNLLDQMLDACVAAMAKLGFGKIKMAIAETGWPNGGGPGASVGNAAIYNRNLAARMATSPGTPLRPGEKMPVFVFSLYNEDKKPG AGTERHWGLFYPNGTAVYQVD | |||
| Full Sequence |
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| Protein Sequence Length: 591 Download |
| MASSYSLLAA VLFLLAAAFS CHCNVAAAKK GHGQKGHGKR AHGLGVNYGT LGDNLPTPTR 60 SVRLLRDAGA GAVKIYDANP EILSAFAGTG IPVSAMVPNE IIPSIAASRA AAHKWVVNNL 120 PKPSSHGPKI VYLLVGNELL SNQAIKDSTW GAIVPAMRNL RHALRKHGMG RVKLGTPLAM 180 DALSASYPPS SSLFRDDIEL KVMRPLLRFL NLTKSYYFVD AYPYFAWAGN QDTISLDYAL 240 FQGKSGAFHV DPQTGLKYTN LLDQMLDACV AAMAKLGFGK IKMAIAETGW PNGGGPGASV 300 GNAAIYNRNL AARMATSPGT PLRPGEKMPV FVFSLYNEDK KPGAGTERHW GLFYPNGTAV 360 YQVDLGGRRR SYPPLPSPPP SPSPSTPPSP PAEQGLWCVL LPGKDEKAVA AALNYACGQG 420 SGTCAAIQPG AVCFEPNTLD AHASYAFNSY WQQFRKSGAS CSFNGLATTT TTDPSHGSCK 480 FPSSPATPPP PPPPPVELGV WCVLAPGKDE KAVEAALNYA CGQGQGTCAA IQPGGACFEP 540 NTLDAHASYA FNSYWQQFRK TGGSCSFNGL AVTTTADPSH GSCKFPSSSN * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-20 | 396 | 468 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam07983 | X8 | 3.0e-20 | 501 | 572 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-39 | 396 | 481 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| smart00768 | X8 | 3.0e-39 | 501 | 585 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-87 | 44 | 364 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001149815.1 | 0 | 23 | 488 | 16 | 479 | glucan endo-1,3-beta-glucosidase A6 [Zea mays] |
| RefSeq | XP_002444717.1 | 0 | 12 | 484 | 26 | 482 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| RefSeq | XP_002444717.1 | 2e-28 | 488 | 588 | 379 | 482 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| RefSeq | XP_002462618.1 | 0 | 44 | 488 | 37 | 483 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
| RefSeq | XP_002462618.1 | 4e-31 | 483 | 588 | 370 | 479 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 44 | 365 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 44 | 365 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 44 | 365 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 44 | 365 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 44 | 365 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
