Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g43830.1 |
Family | CBM43 |
Protein Properties | Length: 218 Molecular Weight: 24210.1 Isoelectric Point: 9.5731 |
Chromosome | Chromosome/Scaffold: 3 Start: 45516813 End: 45520986 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 26 | 104 | 2.4e-29 |
WCIARSGASEKTLQRALDYACSPAGSADCAPIMPSGLCYLPNTLAAHASYAFNSVFQRAREAPGACDFAGTATVTLTDP |
Full Sequence |
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Protein Sequence Length: 218 Download |
MRPLWVAAWA CALVLAWCAR PAGAAWCIAR SGASEKTLQR ALDYACSPAG SADCAPIMPS 60 GLCYLPNTLA AHASYAFNSV FQRAREAPGA CDFAGTATVT LTDPIVEKDS SGSDAKRYDK 120 VMDHAPTLHL QVSTSSKYIL IHVNALWYMR CKLWYMKVSS MAPMVKTQER VYDQRRGDKK 180 VDGEKMKGMC KQIWPTNRTW FKSFLTDIVK IQKKSRE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-20 | 26 | 98 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-35 | 26 | 113 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN33807.1 | 1.99965e-42 | 4 | 104 | 7 | 108 | unknown [Zea mays] |
DDBJ | BAD23212.1 | 2.00386e-43 | 24 | 104 | 32 | 112 | glycosyl hydrolase-like [Oryza sativa Japonica Group] |
DDBJ | BAH91705.1 | 4.99983e-42 | 24 | 104 | 32 | 112 | Os02g0503300 [Oryza sativa Japonica Group] |
RefSeq | NP_001148424.1 | 9.99967e-42 | 4 | 104 | 7 | 108 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | XP_002452133.1 | 5.60519e-45 | 20 | 104 | 32 | 116 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-16 | 22 | 104 | 9 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |