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Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g47480.1 |
Family | GT47 |
Protein Properties | Length: 496 Molecular Weight: 55840.2 Isoelectric Point: 6.9613 |
Chromosome | Chromosome/Scaffold: 3 Start: 49130995 End: 49132752 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 75 | 432 | 0 |
SCDGRYVYMLDIHPRFDLLNACVDGSSSLLEDEHGACVLMSNAGLGPALAPAASGDDGVISSNGWFNTNQYSLEVIFHNRMRHYECLTDDPASSSAVYVP YYPGLELNRHACEANATERDGPSGEFLRWLSSRPEWAAHGGRDHFMVVAKTTWMLRRRVQPDEEAGSCGNRFLDRAEPRNMTVLTYESNIWDRRDMAVPY PSYFHPSSSGAVSAWQARARAAPRPWLFAFAGARRPNGTLLLRDRVIDTCVSVPARCGMFGCDSQRGGLEGCRSPEKLVALFLSARFCLQPRGDSFMRRS SVDAVIAGCVPVFFHEASTFEKQYRWHAPQGNKSGGNYSVFIDPDDVLQGKVDIEEVL |
Full Sequence |
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Protein Sequence Length: 496 Download |
MEAHYHNKCL LYALLLVGSW ICSFLLHLQF FHLSLLRYSF PYYHRLRAAS VPLEATFASS 60 HAFAQDFTSS RRSPSCDGRY VYMLDIHPRF DLLNACVDGS SSLLEDEHGA CVLMSNAGLG 120 PALAPAASGD DGVISSNGWF NTNQYSLEVI FHNRMRHYEC LTDDPASSSA VYVPYYPGLE 180 LNRHACEANA TERDGPSGEF LRWLSSRPEW AAHGGRDHFM VVAKTTWMLR RRVQPDEEAG 240 SCGNRFLDRA EPRNMTVLTY ESNIWDRRDM AVPYPSYFHP SSSGAVSAWQ ARARAAPRPW 300 LFAFAGARRP NGTLLLRDRV IDTCVSVPAR CGMFGCDSQR GGLEGCRSPE KLVALFLSAR 360 FCLQPRGDSF MRRSSVDAVI AGCVPVFFHE ASTFEKQYRW HAPQGNKSGG NYSVFIDPDD 420 VLQGKVDIEE VLGRYTDEEV AAMREEVIRM IPRLLYKDPR VRFQGHMSDA FDIAIDEVLA 480 RTRRIKNGED LGWQI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-48 | 75 | 432 | 373 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA96790.1 | 0 | 1 | 495 | 1 | 516 | Exostosin family protein, expressed [Oryza sativa (japonica cultivar-group)] |
DDBJ | BAH95576.1 | 0 | 140 | 495 | 94 | 455 | Os12g0224400 [Oryza sativa Japonica Group] |
GenBank | EEC69035.1 | 0 | 92 | 495 | 1 | 380 | hypothetical protein OsI_37846 [Oryza sativa Indica Group] |
GenBank | EEE52961.1 | 0 | 92 | 495 | 1 | 413 | hypothetical protein OsJ_35605 [Oryza sativa Japonica Group] |
RefSeq | XP_002443053.1 | 0 | 1 | 494 | 1 | 513 | hypothetical protein SORBIDRAFT_08g007160 [Sorghum bicolor] |