| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g59640.1 |
| Family | GH47 |
| Protein Properties | Length: 585 Molecular Weight: 65994.6 Isoelectric Point: 6.0834 |
| Chromosome | Chromosome/Scaffold: 3 Start: 58768317 End: 58773314 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 54 | 488 | 0 |
| MFYHAYDNYMAYAFPHDELKPLTKSFTDSLSELGNLNLEHLPHDYNGSALTLVESLSSLVVLGNLTEFERGVTWLSENLTFDVDARVNLFECNIRLLGGL ISAHILAKDYISQRKDGVYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVIENETTETSTSGCGSLILEMGALSRLTGDSRYEAAAHRALRKLWS MRSSLNLVGSTLDVLSGKWIEYSSGIGAGVDSFYEYLIKAYILFGSDEYWDMFHSAYLAVQKYFRHGPWYHEADIRTGEATHWQLTSLQAFWPGVQTLLG DVAAANLSHREFYNVWQRFGVLPERYLLDYGILHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVEGGFASIRDVSTMKQEDHQHS FFLSETCKYLFLLYDDSFLRKQNYIFTTEGHPLPI | |||
| Full Sequence |
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| Protein Sequence Length: 585 Download |
| MRSPRLLRPA PARLVAAALL LAALAGGAAA ADISGRDGYG RARRLHMRDK VVEMFYHAYD 60 NYMAYAFPHD ELKPLTKSFT DSLSELGNLN LEHLPHDYNG SALTLVESLS SLVVLGNLTE 120 FERGVTWLSE NLTFDVDARV NLFECNIRLL GGLISAHILA KDYISQRKDG VYQDQLLHLA 180 ENLGSRFLPA FETPTGLPYA WINLKYGVIE NETTETSTSG CGSLILEMGA LSRLTGDSRY 240 EAAAHRALRK LWSMRSSLNL VGSTLDVLSG KWIEYSSGIG AGVDSFYEYL IKAYILFGSD 300 EYWDMFHSAY LAVQKYFRHG PWYHEADIRT GEATHWQLTS LQAFWPGVQT LLGDVAAANL 360 SHREFYNVWQ RFGVLPERYL LDYGILHPTE KYYPLRPEFA ESTFYLYQAT KDPWYLEVGE 420 AIIGSLNYYT KVEGGFASIR DVSTMKQEDH QHSFFLSETC KYLFLLYDDS FLRKQNYIFT 480 TEGHPLPIRS TWHEKIPASD VPSNWTSVKD AEQPIRVSAL SSQVCPETIF RQSFGSTWES 540 ACHVPDVFPN HKCRADDDCG IESVSCKRRT CSTAGYCGLW LAVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03897 | lanti_2_LanM | 0.009 | 173 | 309 | 143 | + type 2 lantibiotic biosynthesis protein LanM. Members of this family are known generally as LanM, a multifunctional enzyme of lantibiotic biosynthesis. This catalysis by LanM distinguishes the type 2 lantibiotics, such as mersacidin, cinnamycin, and lichenicidin, from LanBC-produced type 1 lantibiotics such as nisin and subtilin. The N-terminal domain contains regions associated with Ser and Thr dehydration. The C-terminal region contains a pfam05147 domain, which catalyzes the formation of the lanthionine bridge [Cellular processes, Toxin production and resistance]. | ||
| PTZ00470 | PTZ00470 | 6.0e-65 | 48 | 488 | 478 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 2.0e-143 | 54 | 488 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC73977.1 | 0 | 37 | 583 | 38 | 584 | hypothetical protein OsI_08885 [Oryza sativa Indica Group] |
| RefSeq | NP_001048080.1 | 0 | 37 | 583 | 38 | 584 | Os02g0741300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002280345.1 | 0 | 42 | 583 | 30 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002454305.1 | 0 | 35 | 583 | 30 | 572 | hypothetical protein SORBIDRAFT_04g028330 [Sorghum bicolor] |
| RefSeq | XP_002511454.1 | 0 | 42 | 583 | 34 | 575 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 48 | 500 | 21 | 477 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 45 | 488 | 7 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 45 | 488 | 7 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 45 | 488 | 7 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 40 | 488 | 80 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
