y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g60687.1 |
Family | GT4 |
Protein Properties | Length: 849 Molecular Weight: 96793.1 Isoelectric Point: 6.9178 |
Chromosome | Chromosome/Scaffold: 3 Start: 59564155 End: 59568291 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 570 | 738 | 0 |
EDRNKPIIFSMARLDKVKNITGLVEWYGQNKKLRELVNLVIVGGLLEPSQSKDREEIEEINRMHSLMNKYLLKGQIRWIKAQTERVRNGELYRCIADTRG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDEVSGFHINPLNGKEASDKIAGFFQKCKEDP |
Full Sequence |
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Protein Sequence Length: 849 Download |
MPGGGLKRSD SIANMMPEAL RQTRYQMKGC FQRYVSKGRR LMKNQQLMEE LERSVDDNLE 60 KTKLEEGFLG YIICSTQEAV VLPPFVSFAV RMNPGIWEYI KVHSADLSVE QVTPADYLKS 120 KETLFDEKWA CDDNSLEVDF GALDLSTPRL TLPSSIGNGM QFVSRFMCSK LSGKPEDMKP 180 LLDYLLTLNY RGEKLMISDT LDTVNKLQTA LLLAEVFVAG LQRNTPYQKF EQKFQEWGLE 240 KGWGDTAETC RETLNCLSEV LQAPDPFNME KFFNRVPSVF NIVIFSIHGY FGQEKVLGMP 300 DTGGQVVYIL DQVRALEEEL LQRIKQQGLN VTPKILVLTR LIPEAKGTKC NVELEPVEHT 360 KHSSIVRVPF KSDDGKDLRH WVSRFDIYPY LERYAQDSSV KILEILEGKP DLVIGNYTDG 420 NLVASLMSSK LGVTQGTIAH ALEKTKYEDS DVKWREMDQK YHFSCQFTAD MITMNTSDFV 480 VASTYQEIAG SKEKPGQYES HYAFTMPGLC RYATGINVFD PKFNIAAPGA DQSVYFPFTQ 540 KQKRLTDLHP QIEELLYSKE DNDEHIGYLE DRNKPIIFSM ARLDKVKNIT GLVEWYGQNK 600 KLRELVNLVI VGGLLEPSQS KDREEIEEIN RMHSLMNKYL LKGQIRWIKA QTERVRNGEL 660 YRCIADTRGA FVQPALYEAF GLTVIEAMNC GLPTFATNQG GPAEIIVDEV SGFHINPLNG 720 KEASDKIAGF FQKCKEDPTC WNKMSTAGLQ RIYECYTWQI YATKVLNMGS MYGFWRTLNK 780 EERQAKLCYL QMFYNLQFRQ LVKTVPKLGE QPAQPVGSAM PGRIVPRPKE RQVCPLLRNL 840 LRKERGSN* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 9.0e-62 | 282 | 768 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 5.0e-117 | 281 | 766 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 815 | 815 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 24 | 806 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 8 | 558 | 552 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE03896.2 | 0 | 5 | 846 | 6 | 848 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH66603.1 | 0 | 5 | 846 | 6 | 848 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC76883.1 | 0 | 5 | 846 | 6 | 848 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
GenBank | EEE60617.1 | 0 | 6 | 832 | 7 | 826 | hypothetical protein OsJ_14034 [Oryza sativa Japonica Group] |
RefSeq | NP_001048620.1 | 0 | 5 | 848 | 4 | 846 | Os02g0831500 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 6 | 806 | 8 | 803 | A Chain A, Crystal Structure Of Phosphopentomutase From Streptococcus M |
PDB | 3s29_G | 0 | 6 | 806 | 8 | 803 | A Chain A, Crystal Structure Of Phosphopentomutase From Streptococcus M |
PDB | 3s29_F | 0 | 6 | 806 | 8 | 803 | A Chain A, Crystal Structure Of Phosphopentomutase From Streptococcus M |
PDB | 3s29_E | 0 | 6 | 806 | 8 | 803 | A Chain A, Crystal Structure Of Phosphopentomutase From Streptococcus M |
PDB | 3s29_D | 0 | 6 | 806 | 8 | 803 | A Chain A, Crystal Structure Of Phosphopentomutase From Streptococcus M |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 806 | 1 | 806 | 0 |
BU103683 | 801 | 6 | 806 | 0 |
CX109054 | 601 | 103 | 703 | 0 |
FG227316 | 455 | 279 | 733 | 0 |
GO872338 | 325 | 507 | 831 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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