y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g03190.1 |
Family | CBM43 |
Protein Properties | Length: 162 Molecular Weight: 17384 Isoelectric Point: 7.5219 |
Chromosome | Chromosome/Scaffold: 4 Start: 2546476 End: 2547505 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 38 | 104 | 7.9e-29 |
CAARSTVGDDRLQAALDYACGHGADCSAIQPGAPCFDPNTKTAHASYAFNDYYQRHGRTPSACDFAD |
Full Sequence |
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Protein Sequence Length: 162 Download |
MASPTATTLC FLVVGVLALL ASPALAEFDC EPKGPSFCAA RSTVGDDRLQ AALDYACGHG 60 ADCSAIQPGA PCFDPNTKTA HASYAFNDYY QRHGRTPSAC DFADICEHIR FKSLICMRWA 120 CKLECVDNNP TKIIEGAYCT HKKGLRYCNC KVCVKAPPAH V* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-22 | 36 | 103 | 73 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-31 | 36 | 103 | 68 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27897.1 | 1e-26 | 36 | 102 | 255 | 321 | unknown [Zea mays] |
RefSeq | XP_002462967.1 | 1e-26 | 27 | 103 | 385 | 462 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 2e-25 | 30 | 103 | 568 | 640 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 2e-26 | 33 | 103 | 484 | 554 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 1e-26 | 36 | 103 | 399 | 466 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 36 | 105 | 12 | 81 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |