Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g16026.1 |
Family | GH3 |
Protein Properties | Length: 776 Molecular Weight: 83646.8 Isoelectric Point: 6.5073 |
Chromosome | Chromosome/Scaffold: 4 Start: 16601424 End: 16604619 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 325 | 0 |
GVPRFGVPGYNWWSEGLHGVSMWGHGMHFNGAVRGVTTFPQVLLTTASFDDSIWYRIGQAIGTEARAMFNLGQADGLTIWSPNVNIYRDPRWGRGQETPG EDPATASKYAVAFVRGLQGTSTTTLQTSACCKHATAYDLDDWNRIGRYNFNAKVTAQDLEETFNPPFKSCVVEGKATCVMCAYTSVNGIPACADSGLLTK TIKGEWGMNGYISSDCDAVALLYGTRYSGTPEDAVAAAIKAGLDMNC |
Full Sequence |
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Protein Sequence Length: 776 Download |
MDRRAAFFSY HAGVMGTALL MLVPSVVLGG GPAFSCGPPQ QAQYAFCNRA LPAEQRAADL 60 VAKLTLEEKV SQLGDQAPGV PRFGVPGYNW WSEGLHGVSM WGHGMHFNGA VRGVTTFPQV 120 LLTTASFDDS IWYRIGQAIG TEARAMFNLG QADGLTIWSP NVNIYRDPRW GRGQETPGED 180 PATASKYAVA FVRGLQGTST TTLQTSACCK HATAYDLDDW NRIGRYNFNA KVTAQDLEET 240 FNPPFKSCVV EGKATCVMCA YTSVNGIPAC ADSGLLTKTI KGEWGMNGYI SSDCDAVALL 300 YGTRYSGTPE DAVAAAIKAG LDMNCGNFSQ VHGMAALQQR KMSEQDVDKA LRNLFAIRMR 360 LGHFDGDPLQ SPLYGRLGAQ DVCSPAHKDL ALEAAQNGIV LLKNDAATLP LSRPTAASAS 420 FAVIGPNANE PGALLGNYFG PPCETTTPLQ ALQKFYSKNV RFVPGCDSAA CNVADTYQAS 480 GLAATSDYTI LFMGLSQKQE QEGLDRTSLL LPGKQESLIT AVAAAAKRPI ILVLLTGGPV 540 DITFAKFNPK IGAILWAGYP GQAGGLAIAK VLFGEHNPSG RLPVTWYPEE YTKVPMDDMR 600 MRADPATGYP GRSYRFYKGN AVYKFGYGLS YSKFSRQLVR NSSSNNRAPN TELLAAAAVD 660 CGASRYYLVE EIGGEVCERL KFPAVVEVEN HGPMDGKQSV LLFLRWPTAT EGRPASQLVG 720 FRSQDLRAGE KASVSFDISP CEHFSRTTVD GTKVIDRGSH FLMVDEDEME ISFDS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-52 | 49 | 432 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-55 | 65 | 357 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-60 | 399 | 632 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-75 | 38 | 740 | 783 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 18 | 772 | 783 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX92971.1 | 0 | 30 | 775 | 23 | 771 | beta-D-xylosidase [Oryza sativa Japonica Group] |
GenBank | AAX96800.1 | 0 | 32 | 773 | 109 | 851 | Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa Japonica Group] |
GenBank | EAY80660.1 | 0 | 30 | 775 | 23 | 771 | hypothetical protein OsI_35838 [Oryza sativa Indica Group] |
RefSeq | NP_001067726.1 | 0 | 32 | 775 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002489304.1 | 0 | 25 | 775 | 10 | 750 | hypothetical protein SORBIDRAFT_0010s007570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 115 | 740 | 91 | 698 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3u48_A | 0 | 115 | 740 | 91 | 698 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3u4a_B | 0 | 115 | 740 | 91 | 698 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3u4a_A | 0 | 115 | 740 | 91 | 698 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 2x41_A | 7e-37 | 55 | 738 | 2 | 674 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |