Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g20197.1 |
Family | GH3 |
Protein Properties | Length: 762 Molecular Weight: 81648.4 Isoelectric Point: 7.3452 |
Chromosome | Chromosome/Scaffold: 4 Start: 23263697 End: 23269723 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 64 | 311 | 0 |
AVPRLGVPAYKWWSEGLHGLSFWGHGMHFDGAVRAITSFPQVLLTAASFDQDIWYRIGQAIGTEARALYNLGQAQGLTIWSPNVNIYRDPRWGRGQETPG EDPTTASKYAVAFVKGLQGTSATTLQTSACCKHATAYDLEDWNGVVRYNFNAKVTLQDLADTFNPPFKSCVEEGKATCVMCAYTNINGVPACASSDLITK TFKGDWGLNGYVSSDCDAVALLRDAQRYRATPEDTVAVALKAGLDLNC |
Full Sequence |
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Protein Sequence Length: 762 Download |
MIMPAALLRT AAAATPPFSC GPGSATQGYA FCDKALPVER RAADLVSRLT LAEKVSQLGD 60 EADAVPRLGV PAYKWWSEGL HGLSFWGHGM HFDGAVRAIT SFPQVLLTAA SFDQDIWYRI 120 GQAIGTEARA LYNLGQAQGL TIWSPNVNIY RDPRWGRGQE TPGEDPTTAS KYAVAFVKGL 180 QGTSATTLQT SACCKHATAY DLEDWNGVVR YNFNAKVTLQ DLADTFNPPF KSCVEEGKAT 240 CVMCAYTNIN GVPACASSDL ITKTFKGDWG LNGYVSSDCD AVALLRDAQR YRATPEDTVA 300 VALKAGLDLN CGNYTQVHGM SALQQGKMTE QDVDNALKNL FAVRMRLGHF DGDPRTSALY 360 GSLGAADVCS PAHKNLALEA AQSGIVLLKN DAGILPLDPS AVASAAAIGH NANDPAALNG 420 NYFGPPCETT TPLQGLQGYV KNVKFLAGCD SAACGFAATG QAVTLASSSD YVILFMGLSQ 480 KEEQEGIDRT SLLLPGKQQN LITAVASASK RPVILVLLTG GSVDITFAKS NPKIGAILWA 540 GYPGQAGGLA IARVLFGDHN PSGRLPVTWY PEEFTKVPMT DMRMRADPAT GYPGRSYRFY 600 QGKTVYKFGD GLSYSKFSRQ LVSSTNTHQV PNTNLLTGLT ARTATDGGMS YYHVEEIGVE 660 GCDKLKFPAV VEVQNHGPMD GKHSVMMFLR WPNSTGTGRP VSQLVGFRSQ HLKAGEKASL 720 TFDVSPCEHF ARAREDGKKV IDRGSHFLVV GKDEREISFH S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-51 | 33 | 436 | 410 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-57 | 50 | 343 | 324 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-61 | 385 | 615 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-70 | 35 | 726 | 784 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 18 | 758 | 757 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX92971.1 | 0 | 16 | 759 | 25 | 769 | beta-D-xylosidase [Oryza sativa Japonica Group] |
GenBank | EAY80660.1 | 0 | 16 | 759 | 25 | 769 | hypothetical protein OsI_35838 [Oryza sativa Indica Group] |
RefSeq | NP_001067726.1 | 0 | 16 | 761 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002489304.1 | 0 | 1 | 761 | 2 | 750 | hypothetical protein SORBIDRAFT_0010s007570 [Sorghum bicolor] |
RefSeq | XP_002489310.1 | 0 | 13 | 761 | 23 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 100 | 757 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u48_A | 0 | 100 | 757 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_B | 0 | 100 | 757 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_A | 0 | 100 | 757 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 2x41_A | 4e-35 | 41 | 759 | 3 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB649516 | 273 | 330 | 602 | 0 |
EE187484 | 275 | 45 | 318 | 0 |
CB645319 | 283 | 195 | 477 | 0 |
CB673207 | 271 | 195 | 465 | 0 |
EE185381 | 272 | 48 | 318 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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