y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g20240.1 |
Family | GH3 |
Protein Properties | Length: 768 Molecular Weight: 82219.1 Isoelectric Point: 6.283 |
Chromosome | Chromosome/Scaffold: 4 Start: 23357166 End: 23365145 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 70 | 318 | 0 |
AGVPRLGVPGYKWWNEALHGLATSGKGLHFDGAVRSATSFPQVCLTAAAFDDDLWFRIGQAIGREARALYNLGQAEGLTMWSPNVNIYRDPRWGRGQETP GEDPTTASRYAVAFVRGMQGNSTSLLQASACCKHATAYDLEDWNGVARYNFDAKVTAQDLEDTFNPPFRSCVVDGKASCVMCAYTGINGVPACANADLLT KTVRGDWGLDGYTASDCDAVAIMRDAQRYAQSPEDAVALALKAGLDIDC |
Full Sequence |
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Protein Sequence Length: 768 Download |
MGQTLLLLLL TLPSLMAAVA LAGDPPFSCG QASSSYAFCD AALPVAQRAA DLVSRLTAAE 60 KVAQLGDEAA GVPRLGVPGY KWWNEALHGL ATSGKGLHFD GAVRSATSFP QVCLTAAAFD 120 DDLWFRIGQA IGREARALYN LGQAEGLTMW SPNVNIYRDP RWGRGQETPG EDPTTASRYA 180 VAFVRGMQGN STSLLQASAC CKHATAYDLE DWNGVARYNF DAKVTAQDLE DTFNPPFRSC 240 VVDGKASCVM CAYTGINGVP ACANADLLTK TVRGDWGLDG YTASDCDAVA IMRDAQRYAQ 300 SPEDAVALAL KAGLDIDCGT YMQQHAAAAI QQGKITEEDI DKALKNLFAI RMRLGHFDGD 360 PRTNMYGGLG AADICTAEHR SLALDAAQDG IVLLKNDAGI LPLDRAAVAS TAVIGPNANN 420 PGALIANYFG PPCESTTPLK GIQGYVKDAR FLAGCSSTAC DVATTDQAAA LASTSDYVFL 480 FMGLGQRQES EGRDRTSLLL PGKQQSLITA VADAAQRPVI LVLLSGGPVD VTFAQTNPKI 540 GAILWAGYPG QAGGLAIARV LFGDHNPSGR LPVTWYPEEF TNVPMTDMRM RADPANGYPG 600 RSYRFYQGKT VYKFGYGLSY SSYSRRLLSS GTSTPAPNAD LLASLTTTMP SAENILGSYH 660 VEQIGAQGCE MLKFPAVVEV QNHGPMDGKQ SVLMYLRWPN ATAGRPERQL IGFKKEHLKA 720 GEKAHIKFEI RPCEHLSRVR EDGNKVIDRG SHFLRVDKHE LEITFGA* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-54 | 57 | 422 | 374 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-57 | 391 | 614 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-60 | 69 | 350 | 286 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-73 | 14 | 730 | 804 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 20 | 765 | 768 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX92971.1 | 0 | 23 | 767 | 23 | 771 | beta-D-xylosidase [Oryza sativa Japonica Group] |
GenBank | EAY80660.1 | 0 | 23 | 767 | 23 | 771 | hypothetical protein OsI_35838 [Oryza sativa Indica Group] |
RefSeq | NP_001067726.1 | 0 | 25 | 767 | 35 | 782 | Os11g0297800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002489310.1 | 0 | 17 | 767 | 18 | 772 | hypothetical protein SORBIDRAFT_0010s010920 [Sorghum bicolor] |
RefSeq | XP_002489311.1 | 0 | 8 | 767 | 30 | 791 | hypothetical protein SORBIDRAFT_0010s012040 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 6 | 732 | 10 | 698 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u48_A | 0 | 6 | 732 | 10 | 698 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u4a_B | 0 | 6 | 732 | 10 | 698 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u4a_A | 0 | 6 | 732 | 10 | 698 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 2x41_A | 8e-37 | 61 | 756 | 35 | 698 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |