| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi4g26270.1 |
| Family | GH51 |
| Protein Properties | Length: 659 Molecular Weight: 72079.4 Isoelectric Point: 5.3559 |
| Chromosome | Chromosome/Scaffold: 4 Start: 31544604 End: 31550649 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 170 | 648 | 0 |
| SLASSDGLQKLTSVTVPVAGTSNWTKVEQKLIAKGTNRTSRLQITTNKKGVVWFDQVSLMPSDTFKGHGFRKELISMLLDLKPSFLRFPGGCFVEGEWLR NAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVNTAAIAPFVKDVLDSLEFARGSANSTWGSVRAAMGHPEP FPVKYVAIGNEDCGKKFYVGNYLKFYNAIRVAYPDIQMISNCDGSSRPLDHPADLYDFHVYTDSKTLFNMKGTFDRTSRSGPKAFVSEYAVWRSDAGRGS LLASLAEAAFLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSSSLAASAITWQDSGNSFLRV KIVNFGSDSVSLTISSTGLQASINALGSNATVLTSSNVMDENTFSNPKKVVPVVSPLRNAAEQMQVTLAPHSFSAFDLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MGSKEVLRHA ALCLPLLLIS LGCQCLASSE FQATQTATLK VDASSQLARK IPDTLFGMFF 60 EEINHAGAGG IWAELVSNRG FEAGGPHTPS NIDPWSIIGD DSSIFVATDR TSCFSRNIVA 120 LRMEVLCDNC PAGGVGIYNP GFWGMNIEDG KTYNLIMYVK SAEAAELTVS LASSDGLQKL 180 TSVTVPVAGT SNWTKVEQKL IAKGTNRTSR LQITTNKKGV VWFDQVSLMP SDTFKGHGFR 240 KELISMLLDL KPSFLRFPGG CFVEGEWLRN AFRWRESIGP WEERPGHFGD VWHYWTDDGL 300 GYYEFLQLSE DLGAAPIWVF NNGISHNDEV NTAAIAPFVK DVLDSLEFAR GSANSTWGSV 360 RAAMGHPEPF PVKYVAIGNE DCGKKFYVGN YLKFYNAIRV AYPDIQMISN CDGSSRPLDH 420 PADLYDFHVY TDSKTLFNMK GTFDRTSRSG PKAFVSEYAV WRSDAGRGSL LASLAEAAFL 480 TGLEKNSDIV QMASYAPLFV NDNDQTWNPD AIVFNSWQQY GTPSYWMQKF FRESSGAMIH 540 PITISSSYSS SLAASAITWQ DSGNSFLRVK IVNFGSDSVS LTISSTGLQA SINALGSNAT 600 VLTSSNVMDE NTFSNPKKVV PVVSPLRNAA EQMQVTLAPH SFSAFDLALA QSALVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 1.0e-27 | 456 | 641 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-28 | 238 | 385 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 3.0e-42 | 456 | 641 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK21880.1 | 0 | 1 | 658 | 1 | 656 | AF320325_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum vulgare] |
| GenBank | EEC67598.1 | 0 | 22 | 658 | 21 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001065660.1 | 0 | 22 | 658 | 21 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 22 | 658 | 23 | 660 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442705.1 | 0 | 1 | 658 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-23 | 238 | 649 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
