y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g27697.1 |
Family | GH3 |
Protein Properties | Length: 812 Molecular Weight: 87814.9 Isoelectric Point: 7.0225 |
Chromosome | Chromosome/Scaffold: 4 Start: 32856068 End: 32858754 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 98 | 368 | 0 |
AGAPRVGLPPYKWWSEALHGLSSTGPTTKFDDLKKPRLHSGRAAVFNGTVFANVINSAASFNESLWRSIGQAISTEARAMYNLGKGGLTYWSPNINVVRD PRWGRALETPGEDPFVVGRYAVNFVRGMQDVDDAAAGFNGDPLSRPLKTSACCKHYAAYDVDDWYGHTRFKFDARVTERDMVETFQRPFEMCVRDGDASA VMCSYNRVNGIPACADARLLAGTLRRDWGLHGYIVSDCDAVRVMTDNATWLGYTPAEASAASLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 812 Download |
MPMPMASSTH LAVLAILLLV PLSTARAVLP SSNDDDGGSA KTAAYTKVCD ASRFAAAGLD 60 MSRYRYCDAK LPYGDRVRDL IGWMTVEEKV SNLGDWAAGA PRVGLPPYKW WSEALHGLSS 120 TGPTTKFDDL KKPRLHSGRA AVFNGTVFAN VINSAASFNE SLWRSIGQAI STEARAMYNL 180 GKGGLTYWSP NINVVRDPRW GRALETPGED PFVVGRYAVN FVRGMQDVDD AAAGFNGDPL 240 SRPLKTSACC KHYAAYDVDD WYGHTRFKFD ARVTERDMVE TFQRPFEMCV RDGDASAVMC 300 SYNRVNGIPA CADARLLAGT LRRDWGLHGY IVSDCDAVRV MTDNATWLGY TPAEASAASL 360 KAGLDLDCGE SWIVQKGKPV MDFLSTYGMA AVRQGKMRES DIDNALVNLY TTLMRLGYFD 420 GMPRYESLDE KDICSEAHRS LALDGARQSM VLLKNLDGLL PLDASKLASV AVRGPHAEAP 480 EKVMDGDYTG PPCRYITPRE GISKDVNISQ QGGDVTIYMG GINMHIEREG NDREDLLLPK 540 NQTEEILRVA AASPSPIVLV ILSGGGIDVS FAQSHPKIGA ILWAGYPGGE GGHAIADVIF 600 GRYNPGGRLP LTWFKNKYIH QLPMTSMALR PRPEHGYPGR TYKFYDGPDV LYPFGYGLSY 660 TKFRYELLNK ETAVTLAPGR RHCRQLSYKT GSVGPDCPAV DVASHACAET VSFNVSVVNA 720 GKADGANAVL VYTAPPAELA GAPIKQVAAF RRVAVKAGAA ETVVFTLNVC KAFGIVEKTA 780 YTVVPSGVST VIVENGDSSA VSFPVQISFS A* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-37 | 84 | 489 | 432 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-38 | 466 | 661 | 224 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-53 | 80 | 412 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-63 | 146 | 769 | 688 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 62 | 797 | 775 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB55751.1 | 0 | 45 | 811 | 43 | 816 | putative alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I [Oryza sativa Japonica Group] |
GenBank | EAY81859.1 | 0 | 38 | 810 | 41 | 815 | hypothetical protein OsI_37025 [Oryza sativa Indica Group] |
RefSeq | NP_001068511.1 | 0 | 11 | 810 | 15 | 815 | Os11g0696400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146482.1 | 0 | 45 | 810 | 59 | 834 | hypothetical protein LOC100280070 [Zea mays] |
RefSeq | XP_002437062.1 | 0 | 28 | 810 | 25 | 808 | hypothetical protein SORBIDRAFT_10g020500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 77 | 767 | 7 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u48_A | 0 | 77 | 767 | 7 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_B | 0 | 77 | 767 | 7 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 3u4a_A | 0 | 77 | 767 | 7 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2x41_A | 2e-36 | 75 | 769 | 2 | 676 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |