Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi4g30980.1 |
Family | CE8 |
Protein Properties | Length: 615 Molecular Weight: 66980.2 Isoelectric Point: 8.5585 |
Chromosome | Chromosome/Scaffold: 4 Start: 36730729 End: 36732769 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 300 | 596 | 0 |
NVVVAKDGSGKFKTINEALAAMPKTYAGRYVIYVKEGVYEEYVVITRQMANVTVYGDGAKKSIVTGKKNFVDGLTTFKTATFAALGDGFMAIGMAFQNTA GPEKHQAVALLVQSDKSIFLNCRMDAFQDTLYAHSQTQFYRNCIITGTIDFIFGDAAAMFQNCIITFRRPMDNQQNIATAQGRADGREATGFVLQKCELN AEPPLTAPGRPPIRNYLGRPWREFSRTIIMESEIPALIDKAGYMPWAGDFGLKTLFYAEYGNKGPGADTAGRVNWPGYKKALSKDEATKFTLENFLH |
Full Sequence |
---|
Protein Sequence Length: 615 Download |
MSSSAFGDFG PLTERRRAEK ARQQQKRLMI AGGIVIIIII IVCGVAFVYN GKSGKDKDGK 60 GSSSKKGSSS SKGKSGSSSG GDDDEESSAA PMDLKAVSKT ITILCKQTDF QVTCQESLSK 120 AANASTTSPK DVVRTAVQVI GEAISQAFDR ADLIMSNDPR VKAAVADCKE FFEYAKDELN 180 RTLSGMDAKD SLTKQGYQLR VWLSAVIAHQ ETCIDGFPDG EFRTKVKDSF VKGKELTSNA 240 LALIEQASTF LAGIKIPEKR RLLAEEGEPV LGDDGIPEWV PDSERRVLKG GGFKNTMTPN 300 VVVAKDGSGK FKTINEALAA MPKTYAGRYV IYVKEGVYEE YVVITRQMAN VTVYGDGAKK 360 SIVTGKKNFV DGLTTFKTAT FAALGDGFMA IGMAFQNTAG PEKHQAVALL VQSDKSIFLN 420 CRMDAFQDTL YAHSQTQFYR NCIITGTIDF IFGDAAAMFQ NCIITFRRPM DNQQNIATAQ 480 GRADGREATG FVLQKCELNA EPPLTAPGRP PIRNYLGRPW REFSRTIIME SEIPALIDKA 540 GYMPWAGDFG LKTLFYAEYG NKGPGADTAG RVNWPGYKKA LSKDEATKFT LENFLHAQPW 600 IDPTGTPVKY DFFG* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 9.0e-140 | 93 | 607 | 523 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 5.0e-145 | 95 | 612 | 522 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 5.0e-152 | 98 | 607 | 525 | + pectinesterase | ||
pfam01095 | Pectinesterase | 1.0e-156 | 300 | 595 | 296 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 97 | 613 | 523 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34013.1 | 0 | 1 | 613 | 1 | 629 | unknown [Zea mays] |
GenBank | EAZ44838.1 | 0 | 93 | 613 | 162 | 689 | hypothetical protein OsJ_29475 [Oryza sativa Japonica Group] |
RefSeq | NP_001063246.1 | 0 | 3 | 613 | 2 | 616 | Os09g0433700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132793.1 | 0 | 93 | 613 | 97 | 622 | hypothetical protein LOC100194282 [Zea mays] |
RefSeq | XP_002462429.1 | 0 | 87 | 613 | 92 | 627 | hypothetical protein SORBIDRAFT_02g025460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 295 | 607 | 3 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 300 | 605 | 4 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-16 | 298 | 521 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-16 | 298 | 521 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-16 | 298 | 521 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |