| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi4g35500.1 |
| Family | GH29 |
| Protein Properties | Length: 489 Molecular Weight: 53429.4 Isoelectric Point: 7.9828 |
| Chromosome | Chromosome/Scaffold: 4 Start: 40886290 End: 40888167 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 41 | 341 | 0 |
| NAAQLAWQRREVIMFFHFGMNTFTDSEWGTGAEDPSMFAPAALNATQWMDAASAAGASLAILVAKHHDGFCLWPSAYTAHSVRASPFHNGAGDVVREFTD AAHARGIDAGLYLSPWDRHDARYGREVEYNEYYLAQLHELLTRYGKVSEIWFDGAKGKNATNMTYHFQEWFQTVRQLQSSINIFSDAGPDVRWVGDEQGF AGATCWSTVNRSMITIGATGIEKYLNNGDPRGTDWVPPECDVSIRPGWFWHKNETAKPRSKLLEIYYNSVGRNCVLLLNVPPNSTGLVDARDIARLREFR A | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MGVASLTLLC LVAAAAAGMA SSAPGAGPRV PPPLPVLPIP NAAQLAWQRR EVIMFFHFGM 60 NTFTDSEWGT GAEDPSMFAP AALNATQWMD AASAAGASLA ILVAKHHDGF CLWPSAYTAH 120 SVRASPFHNG AGDVVREFTD AAHARGIDAG LYLSPWDRHD ARYGREVEYN EYYLAQLHEL 180 LTRYGKVSEI WFDGAKGKNA TNMTYHFQEW FQTVRQLQSS INIFSDAGPD VRWVGDEQGF 240 AGATCWSTVN RSMITIGATG IEKYLNNGDP RGTDWVPPEC DVSIRPGWFW HKNETAKPRS 300 KLLEIYYNSV GRNCVLLLNV PPNSTGLVDA RDIARLREFR ATVTRIFATD LAAGSTARAS 360 SERGAGFAAG NVLLDDAGET YWAPTAEDGR RNGYWIELRR PAATRARAFN VVRIQEHVVL 420 GQRVERHEVY VDGVAVVANG TTVGHKRLHR LPVAVAGKTV RIWFVARRGV PLVSAVGLHL 480 DPFATNVM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01120 | Alpha_L_fucos | 1.0e-24 | 54 | 339 | 319 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 1.0e-25 | 77 | 339 | 281 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 1.0e-47 | 44 | 426 | 401 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR35251.1 | 0 | 41 | 488 | 39 | 485 | unknown [Zea mays] |
| GenBank | EEC84898.1 | 0 | 42 | 484 | 45 | 488 | hypothetical protein OsI_32076 [Oryza sativa Indica Group] |
| RefSeq | NP_001063703.1 | 0 | 42 | 484 | 45 | 488 | Os09g0520800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151568.1 | 0 | 41 | 488 | 39 | 485 | alpha-L-fucosidase 1 [Zea mays] |
| RefSeq | XP_002462685.1 | 0 | 41 | 484 | 40 | 481 | hypothetical protein SORBIDRAFT_02g030220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 35 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 35 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ues_B | 0 | 40 | 474 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 40 | 474 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 40 | 474 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
