| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi4g43710.1 |
| Family | GH51 |
| Protein Properties | Length: 657 Molecular Weight: 71737.5 Isoelectric Point: 4.5872 |
| Chromosome | Chromosome/Scaffold: 4 Start: 47319971 End: 47327423 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 188 | 650 | 0 |
| SSNWKKLDHKLVAKGTDRTSRLQITANKKGVVWFDQVSLMPSDTYKGHGFRTELISMLLELKPRFLRFPGGCFVEGDRLRNAFRWRDSIGPWEERPGHYG DVWNYWTDDGLGYYEFLQLSEDLGAAPVWVFNNGISHHDEVETAAIAPFVKDILDSLEFAKGSADSPWGSVRAAMGHPEPFPVKYVAIGNEDCGKTYYRG NYLKFYYAIREAYPDIQMISNCDGSSVPLDHPADLYDFHVYTGSKALFSMKNTFDRTSRGGPKAFVSEYAVTGNDAGRGSLLASLAEAAFLTGLERNSDV VQMASYAPLFINDNDRTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGAIIHPITVSSSYSDSLAASAITWHDNENNFLRVKIVNFGTDAVSLSISATGLQ GSVNALGSTATILTSGNVMDENSFSNPNKVVPVRIALRDAAEEMEVMLAPHSFSAFDLALSQS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 657 Download |
| MGLEEGGRCT IFCLLLLLSV GCKCLASGSE VTQEASLSVD ASPLLAQKIP DTLFGIFFEE 60 INHAGAGGIW AELVNNRGFE AGGPHTPSNV DPWSIVGDDS SIFVATDRTS CFSRNIVALR 120 MEVLCDNCPA GGVGIYNPGF WGMNIEDGET YNLVMHVKSP ETTELTVSLT SSDGLQILAS 180 ATIQVAGSSN WKKLDHKLVA KGTDRTSRLQ ITANKKGVVW FDQVSLMPSD TYKGHGFRTE 240 LISMLLELKP RFLRFPGGCF VEGDRLRNAF RWRDSIGPWE ERPGHYGDVW NYWTDDGLGY 300 YEFLQLSEDL GAAPVWVFNN GISHHDEVET AAIAPFVKDI LDSLEFAKGS ADSPWGSVRA 360 AMGHPEPFPV KYVAIGNEDC GKTYYRGNYL KFYYAIREAY PDIQMISNCD GSSVPLDHPA 420 DLYDFHVYTG SKALFSMKNT FDRTSRGGPK AFVSEYAVTG NDAGRGSLLA SLAEAAFLTG 480 LERNSDVVQM ASYAPLFIND NDRTWNPDAI VFNSWQQYGT PSYWMQTLFR ESSGAIIHPI 540 TVSSSYSDSL AASAITWHDN ENNFLRVKIV NFGTDAVSLS ISATGLQGSV NALGSTATIL 600 TSGNVMDENS FSNPNKVVPV RIALRDAAEE MEVMLAPHSF SAFDLALSQS ELVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG3534 | AbfA | 0.003 | 558 | 641 | 88 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
| COG3534 | AbfA | 1.0e-28 | 236 | 381 | 146 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
| pfam06964 | Alpha-L-AF_C | 8.0e-33 | 479 | 639 | 168 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| smart00813 | Alpha-L-AF_C | 4.0e-45 | 454 | 639 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK21879.1 | 0 | 1 | 656 | 1 | 658 | AF320324_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-I [Hordeum vulgare] |
| GenBank | ACN27961.1 | 0 | 1 | 656 | 1 | 656 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 1 | 656 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001065660.1 | 0 | 1 | 656 | 1 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442705.1 | 0 | 1 | 656 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 6e-19 | 235 | 648 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 6e-19 | 235 | 648 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 6e-19 | 235 | 648 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 6e-19 | 235 | 648 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 6e-19 | 235 | 648 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
