Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g44336.1 |
Family | GH5 |
Protein Properties | Length: 390 Molecular Weight: 43266.3 Isoelectric Point: 4.1865 |
Chromosome | Chromosome/Scaffold: 4 Start: 47775533 End: 47777817 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 32 | 362 | 1.6e-36 |
FIIHGFNTYWLMSFAADDATRPRVTAAIAEAAAAGLNVCRTWAFADGGYRALQTAPFCYDEEVFQALDFVVSEARRHKMRLILSLCNNWEDYGGKAQYVR WGNEAAGLDLTSDDEFFSDPTIKSYYKAFVEAVLTRINTITNVAYKDDPTILAWELINEPRCSSDPSGDTLQTWIEEMASYVKSIDPVHLLEIGVEGFYG PSTPELLGINPDDYSGNAGTDFIRNHQAMGIDLASVHIYSDTWLPDSKEENHLEFVNSWMQQHIDDAANLLGMPIMIGEFGLSLKDGKFDSGFRETFMET VYNNFLSSWEGGVIGGGCLLWQLFPEGAEHM |
Full Sequence |
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Protein Sequence Length: 390 Download |
MASPDAEEEW AAVERRGAHL VTATAAGEEI PFIIHGFNTY WLMSFAADDA TRPRVTAAIA 60 EAAAAGLNVC RTWAFADGGY RALQTAPFCY DEEVFQALDF VVSEARRHKM RLILSLCNNW 120 EDYGGKAQYV RWGNEAAGLD LTSDDEFFSD PTIKSYYKAF VEAVLTRINT ITNVAYKDDP 180 TILAWELINE PRCSSDPSGD TLQTWIEEMA SYVKSIDPVH LLEIGVEGFY GPSTPELLGI 240 NPDDYSGNAG TDFIRNHQAM GIDLASVHIY SDTWLPDSKE ENHLEFVNSW MQQHIDDAAN 300 LLGMPIMIGE FGLSLKDGKF DSGFRETFME TVYNNFLSSW EGGVIGGGCL LWQLFPEGAE 360 HMDDGYAVFI AKSPATLNVL ENHSRRLDS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.007 | 66 | 312 | 270 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 0.0004 | 175 | 226 | 61 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 2.0e-7 | 31 | 338 | 319 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-25 | 66 | 360 | 304 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ19452.1 | 0 | 13 | 388 | 2 | 368 | hypothetical protein OsJ_35013 [Oryza sativa Japonica Group] |
GenBank | EEC67554.1 | 0 | 7 | 388 | 6 | 378 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
GenBank | EEE52650.1 | 0 | 7 | 388 | 6 | 381 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
Swiss-Prot | Q0IQJ7 | 0 | 31 | 388 | 15 | 371 | MAN8_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 8; AltName: Full=Beta-mannanase 8; AltName: Full=Endo-beta-1,4-mannanase 8; AltName: Full=OsMAN8 |
Swiss-Prot | Q2RBB1 | 0 | 7 | 388 | 6 | 378 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 34 | 387 | 23 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 16 | 366 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 16 | 366 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 16 | 366 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 16 | 366 | 17 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HX195966 | 251 | 4 | 254 | 0 |
HX182899 | 239 | 4 | 242 | 0 |
DT747977 | 298 | 13 | 310 | 0 |
EX342637 | 279 | 37 | 314 | 0 |
JK987915 | 300 | 7 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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