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Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g44810.1 |
Family | AA1 |
Protein Properties | Length: 570 Molecular Weight: 61081.9 Isoelectric Point: 4.9467 |
Chromosome | Chromosome/Scaffold: 4 Start: 48104749 End: 48109015 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 28 | 551 | 0 |
KEQQHEFVIQETAVKRLCNGGMSIVTANGQFPGPTVEVSEGDSLVVNVVNNATYNVTIHWHGVRQMRTGWSDGPEFVTQCPIRPGQSYTYRFTVTGQEGT LWWHAHSSWLRATVYGALLIRPRDGVPYPFDFAAETVPILLGEWWDMNPIDVIRAATRTGAAPNVSDALTVNGQPGDLYSCSSSQDTTVFPVKSGETNLL RFINAALNTELFVSLAGHAMTVVGADASYTKPYNTSVLVLGPGQTTDVLVTFDQPPGRYYLAARAYASAQGVPFDNTTTTAIFDYGAGDGTTSPAMPTLP AYNDTATVTAFTTSLRNLHSIGLPSVVDEDLFFTVGVGLFNCSKGQSCGGPNNTRFAASINNVSFVLPSTVSILQAHYDGGANAGVFTTDFPANPPVQFD YTAQNVSRGLWQPVPGTKLYNLKYGAVVQVVLQGTNIFAGENHPIHIHGYDFYILAEGFGNFDAATDTAKFNLDDPPMRNTVGVPVNGWAVIRFVADNPG VWLMHCHLDVHITWGLAMAFLVKD |
Full Sequence |
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Protein Sequence Length: 570 Download |
MASSACSSLF ISIIAALLLC CSQLTAAKEQ QHEFVIQETA VKRLCNGGMS IVTANGQFPG 60 PTVEVSEGDS LVVNVVNNAT YNVTIHWHGV RQMRTGWSDG PEFVTQCPIR PGQSYTYRFT 120 VTGQEGTLWW HAHSSWLRAT VYGALLIRPR DGVPYPFDFA AETVPILLGE WWDMNPIDVI 180 RAATRTGAAP NVSDALTVNG QPGDLYSCSS SQDTTVFPVK SGETNLLRFI NAALNTELFV 240 SLAGHAMTVV GADASYTKPY NTSVLVLGPG QTTDVLVTFD QPPGRYYLAA RAYASAQGVP 300 FDNTTTTAIF DYGAGDGTTS PAMPTLPAYN DTATVTAFTT SLRNLHSIGL PSVVDEDLFF 360 TVGVGLFNCS KGQSCGGPNN TRFAASINNV SFVLPSTVSI LQAHYDGGAN AGVFTTDFPA 420 NPPVQFDYTA QNVSRGLWQP VPGTKLYNLK YGAVVQVVLQ GTNIFAGENH PIHIHGYDFY 480 ILAEGFGNFD AATDTAKFNL DDPPMRNTVG VPVNGWAVIR FVADNPGVWL MHCHLDVHIT 540 WGLAMAFLVK DGVGELQSLG APPPDLPIC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 5.0e-45 | 35 | 152 | 120 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-64 | 45 | 547 | 534 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-68 | 51 | 558 | 554 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-81 | 51 | 547 | 541 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 27 | 569 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF27393.2 | 0 | 52 | 569 | 1 | 522 | Os11g0108700 [Oryza sativa Japonica Group] |
RefSeq | NP_001044679.1 | 0 | 24 | 569 | 21 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065548.1 | 0 | 28 | 569 | 23 | 567 | Os11g0108700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065948.1 | 0 | 28 | 569 | 23 | 567 | Os12g0108000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448873.1 | 0 | 21 | 569 | 32 | 587 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 45 | 547 | 19 | 521 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asq_A | 0 | 45 | 547 | 19 | 521 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asp_B | 0 | 45 | 547 | 19 | 521 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1asp_A | 0 | 45 | 547 | 19 | 521 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1aso_B | 0 | 45 | 547 | 19 | 521 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |